Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3289 |
Symbol | |
ID | 8727042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3970749 |
End bp | 3973265 |
Gene Length | 2517 bp |
Protein Length | 838 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | phage tape measure protein |
Protein accession | YP_003388099 |
Protein GI | 284038169 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.4409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAA ACTTACAGGC TGTATTTACC CTTAATGACA GTGCGTTTGC TCGCGGTACG GATCGCATTT TAGATGCGCT TTCCAGAATC GAAGCGGGCG GCATTCGTAC AGGTAACCGG CTGGAAAACT CGTTTAACTC TCCGCTAAAG TCTATTACCA ACCTGGTCGG CGGTTTCTTC GCTGTCGACA AAGCAATGGG GCTGCTTAAG CAGGGGTTAC AGATAACGTC GGATTTTGAA CGGCTGGACG CAGGGCTAAA CGCTGTTAGT ACCTCATCTA TTGATTTTGC CCGTTCACAG CTTTATCTAC GCGAATTATC CGACCGGCTA GGTATAAGCT ACGAAACGCT AGCTAGTTCC TACAGAGGGC TAAAAGCAGC TACAAACGGG ACCGTTTTAG AGGGGAAAGC TACTGAAAAA ATCTTTACGT CGGTAGTTCA GGCTGGCGCA GCGCTGAAGC TGTCGAATGA CGAAGTAAAG GGCTCATTAC TGGCTATTAG CCAGATGATG TCGAAAGGCA CCGTTAGCGC TGAAGAACTG CGGGGCCAAT TAGGGGAACG GCTACCAGGG GCGTTTAAGT TAATGGCTGA TGCGCTACAC GTATCAGAGC AGGAACTAAA CAAGATGCTG CAAACGGGTT CGGTAATGGC TGCGGACGCC CTACCGAAAC TGGCGGCTGA ACTCGAAAAA GTCTATGGCT CGAAAGCGCT GGCTAACGCT AATTCAATGG CGGGCGGCTG GACCAGAGCC ACCGACCAGC TTAAACTATT CACGGCTGAA TTTTCGAAAG AAAACGGGAT AGATTCGTTT TTCGCCAAAC TTGGTAATGG TGTAGCCAAC TACATTAACT TACTGCGCAG GGCAAAAGCG GAAACGGGCA GCTATACCGG CACGGTCGTA ACGGACCCGA CTGCGATTAA GCAAAAGGAA ATTTTCGCTA AGTATTCGAC TGCGGAGAAG CAGAACTATA TTGGCTACCT GGCCAGGCAG ATTCGAACCG CTGAAGGTCG TTCTGATGCC CTGGCAGCGC TGGACCCTAC AGAGGAAAAC AGCAAGAAAA GCATAGCGTT CGAAAATTAC ATAAAGTCTA TGCGTAGCAA GATGGCTACG TATAGAAAAA TGTTAAACGA AGAATACGCA GAGAACGAAC GCCAGGCTAA AGCTACGGCC AGTAAGGTTT CTGATCCTAT AGCGCTGCTG GAAAAGGCAA AGGACCGGTT TAAGTACCTG ACAGACCTAA AAGCAGGTCT GGCGTTACAG GGTAAAAATC TGTCCAGCGG CCAGGCTACA GAACTGGCAA AGCTAACCAA GCAGCTACAG TACGCAGGGG TAAAGAAGGT AGCTGGTACT ACCGGAAAAA CGGATTTTTC CGTTCTTTCT CATCTCGAAA CGATTAGGAA GTTTCTTGAT AGTGACCTGC AAAAGCAGCG GTCTCTAACG GGGTTTGTGT CGCCAGAAAC AGCGCATGAA CTAGATAATG TATTGACTCA AATCAAACGC ATAAAAGGCG AAGTCGAAAA ACCGGCAACG CTGAAGATTA AAGGGACAGG ACTGCTGAAA GAAAACCTGC AGTCGGAAAA CGACCGCCAA GGACGTCTAA GAAGTCCGTT GTTTGACCGC TTGAGCGAAC CAGCCCGTTA CCGGACACTT GGGTTTTACA ATGATGAAAT CGATAAAATC AAAAGCAAAA TTGCTACGCT GTCACTTAAA AATTTGGCTA TACCTAAAAC TGCAATTGAT ACTCTAAAGG ATTACACTAG CCAACTGGAT AAAGCAGACC TGGCTGTAAG TAAGGTGCTA AAGCTGCTAG ATCGTCAACG CAATATCAAT GCGGGCAAGT CTTTAGTTTC TGATGTCCAA AACCAGACAC CCGATGAGAA GTGGAATAGC GTTGGGGGTA TTTCTAGTAA TTGGGGTGAC ACTGCTTTAG AGAACCTAAC TAAGTACCGT GAGCAGCTAA TCACAAATGC CCAAGAAATG ACCGGGGCTT TACAAAATGT ACTCATTCAG GGTGCATCTG GCGCCACAGC TGCAATGGGT GCTTTGGTCG ATGGCTTGAT AGAAGGTACA AAGGGCATTG AAGATTTGCC AGGAGTTATT TTAGGCGTTG TAGCGGACAC ATTACGGAAT TTAGCAAAAA CGCTAGCTGC TTCAGGTGCT GCTTTAATGT TTGTTCCAGG CTTTCAATTA GAAGCGGGAG CGCAGTTAGC CGGGGCTGTA GGGTTGTACG CTGCGGCCGG ATTAGCACAG TCAGCGGCAC AGCCAAAGCG TAAACAGATG GCCAAAGGGG GCACGTTAAG CGGTCCTACG GACATTACCG CTGGCGAATA TCCTGGCGCT AGTAGACGGC CAGAATGGGT TTCACCTGTC GACGTAGGTG CTGATCTGAT CGCTGAACGG ATAGCCAAGC GGGGCGGTAT GGGCGGCATG TCTGGAACGG TTGTTTTTGA GATTGCAGCC GACAAACTAC GGGGCGTCCT GCAACATGGC CAGCGTAGTC TACTAAGCCT GGGATAA
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Protein sequence | MTENLQAVFT LNDSAFARGT DRILDALSRI EAGGIRTGNR LENSFNSPLK SITNLVGGFF AVDKAMGLLK QGLQITSDFE RLDAGLNAVS TSSIDFARSQ LYLRELSDRL GISYETLASS YRGLKAATNG TVLEGKATEK IFTSVVQAGA ALKLSNDEVK GSLLAISQMM SKGTVSAEEL RGQLGERLPG AFKLMADALH VSEQELNKML QTGSVMAADA LPKLAAELEK VYGSKALANA NSMAGGWTRA TDQLKLFTAE FSKENGIDSF FAKLGNGVAN YINLLRRAKA ETGSYTGTVV TDPTAIKQKE IFAKYSTAEK QNYIGYLARQ IRTAEGRSDA LAALDPTEEN SKKSIAFENY IKSMRSKMAT YRKMLNEEYA ENERQAKATA SKVSDPIALL EKAKDRFKYL TDLKAGLALQ GKNLSSGQAT ELAKLTKQLQ YAGVKKVAGT TGKTDFSVLS HLETIRKFLD SDLQKQRSLT GFVSPETAHE LDNVLTQIKR IKGEVEKPAT LKIKGTGLLK ENLQSENDRQ GRLRSPLFDR LSEPARYRTL GFYNDEIDKI KSKIATLSLK NLAIPKTAID TLKDYTSQLD KADLAVSKVL KLLDRQRNIN AGKSLVSDVQ NQTPDEKWNS VGGISSNWGD TALENLTKYR EQLITNAQEM TGALQNVLIQ GASGATAAMG ALVDGLIEGT KGIEDLPGVI LGVVADTLRN LAKTLAASGA ALMFVPGFQL EAGAQLAGAV GLYAAAGLAQ SAAQPKRKQM AKGGTLSGPT DITAGEYPGA SRRPEWVSPV DVGADLIAER IAKRGGMGGM SGTVVFEIAA DKLRGVLQHG QRSLLSLG
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