Gene Slin_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3260 
Symbol 
ID8727013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3940200 
End bp3941270 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content57% 
IMG OID 
Productpurine nucleoside permease 
Protein accessionYP_003388070 
Protein GI284038140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTGA CGAAAAAACT ATCCCTATTT GGCTGGCTGC TGTTTGCCAG TCTGCGCATG 
TACGGCCAGG CGACCGCTCC CATTCCGGTA AAGGCCGTTA TTGTGACCAT GTTTGAAATT
GGTGCCGACA CCGGCGACCG GCCCGGCGAG TTTCAATACT GGGTAGAGCG GTTGCCGCTA
TCCCAAACCA TTCCGTTTCC GCAGGGCTAC CGGAACCTGC GTTACAACCC AGAGAAGCAG
GTTTTAGGCA TTTGCACGGG CATGGGAACA GCCCGTTCGG CGGCTTCCAT CATGGCGCTG
GGCATGGACC CCCGTTTCGA CCTGTCACAT GCCTACTGGC TCGTGGCGGG CATTGCCGGT
ATCGATCCGC AGGATGGCAG TGCGGGCTCG GCAGTCTGGG CCGAATGGCT GGTCGATGGT
GACCTCGCCC ACGAAATCGA CCCACGCGAG ATGCCTAAGG AGTGGTCAAC GGGCTACCTC
CCGTTGCGAC GGGCCAAGCC CTACGAGCAA CCCGTTCAGG ATAACGATTT CACGGTGGCC
ATTCACCTCA ATCCGGGTCT GGCCAACTGG GCATTTGACC TGACGAAAAA CATCAAACTG
GCCGATTCCG AGACGCTTCA AAAGATGCGC GCCGTTTACC GCGATTTCCC CGAAGCCCGG
AAACCACCCC GCGTTATGAT GGGCGACCAT ATTGCCGCCA TGACGTTCTG GCACGGCAAG
TACCTCAACG ACTGGGCTAA TGACTGGGTT AAGTATTGGA CCAAAGGCAA AGGAAACTTC
GTTACCTCGG CCATGGAAGA CACGGGAACC GGACAATCGC TACAGTGGCT TACCAATGCC
GGAAAAGCCG ACATCAATCG GTACATGGTA CTCCGAACCG CCAGCAATTA TACCATGCAG
CCGTCTGGCG TAACGGCCGC ACAGAATCTG ACCAATGGCG GCAAGGAAGT TGGTGAGCGG
TACACGGCGT ACATCCCGGC CCTCGAAGCC GCGTATCAGG CAGGCAGCAC GGTTGTCAAT
AAATTAGTTG CTGACTGGTC TGTATACAAA GACAAATTAC CGGGCAAGTA G
 
Protein sequence
MYLTKKLSLF GWLLFASLRM YGQATAPIPV KAVIVTMFEI GADTGDRPGE FQYWVERLPL 
SQTIPFPQGY RNLRYNPEKQ VLGICTGMGT ARSAASIMAL GMDPRFDLSH AYWLVAGIAG
IDPQDGSAGS AVWAEWLVDG DLAHEIDPRE MPKEWSTGYL PLRRAKPYEQ PVQDNDFTVA
IHLNPGLANW AFDLTKNIKL ADSETLQKMR AVYRDFPEAR KPPRVMMGDH IAAMTFWHGK
YLNDWANDWV KYWTKGKGNF VTSAMEDTGT GQSLQWLTNA GKADINRYMV LRTASNYTMQ
PSGVTAAQNL TNGGKEVGER YTAYIPALEA AYQAGSTVVN KLVADWSVYK DKLPGK