Gene Slin_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3190 
Symbol 
ID8726943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3865873 
End bp3867144 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content57% 
IMG OID 
ProductBeta-ketoacyl synthase 
Protein accessionYP_003388000 
Protein GI284038070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACC GAGTTGTTAT TACGGGTCTG GGTGTTGCGG CACCCAATGC GGTGGGCATC 
CCGTCGTTTC TGGACGCGAT TCAGGCGGGG AAAAGCGGCA TTGTGTTTCA GCCCGATCTG
GCGGAGCTGA AATTCTCGTG CCAGATTGGC GGTATTCCGC CAGTTAACGA AGCCATTAGA
AATCAGTATT TCAGCGAACT GCAACTCCGT CAACTCAACA GCAGTGGCAT CATCTATGGC
GTGATCGCGG GCATGGAAGC CTGGCAAAAT GCCGGATTAC CCGTTGCCAC CGATGAGCCG
GATTGGGATA GCGGTATCGT TTTCGGCACG GGTATGCTGG GCGTCGATAA ATTCCGGGAG
TCCATTTACA AAGTCGATGA GGGTCAGGTC AGGCGGTTGG GCAGCACGGT TGTTATCCAG
ACGATGACCA GTGGTGTAAG TGCCTTTCTC GGTGGTATGA TTGGCTGCGG CAATCAACTG
TCGGCCAATT CATCGGCTTG TGCTACGGGT ACGGAAGCCC TGTTGCTGGG ATACGAACGC
ATTGCCAACG GACAGGCAAA ACGGGTACTG GCGGGTAGTT GCAGTGACCA CGGCCCGTAC
ATTTGGGGTG GGTTCGACGC CATGCGCGTG ATGCCGTATC AGTTCAACAA CGACCCCGAA
CGGGCGTCGA GGCCCCTGAG CGCCACGGCC AGCGGATTCG TGCCGGGCAG CGGTGCTGGT
GCGCTGGTGC TGGAATCGCT GGAGTCGGCG CTGGAGCGGA AGGCCACCAT TTACGCCGAG
GTGCTGGGCG GACATCAGAA TTCGGGCGGG CAGCGGGGCG GTGGTTCCAT GACGGCCCCC
AACGCGCAGG CCGTAAAGCG ATGCATTCAG CAAGCCATTC AACAGGCAGG GGTTCAGCCC
GACGATATTG ACATTATTGA TGGGCATTTG ACGGCCACCA TTAAAGACGC AGCCGAAGTA
ACGGCCTGGT GCGAAGCCCT CGGTCGGCGG GGGGACGATT TTCCGTATAT TAACTCGCTG
AAGTCGATGG TGGGGCATTG CTTAAGTGCC GCCGGGAGCA TCGAGTGTGT GGCATCCGTG
CTGGAATTGC ACCACGGATT CGTTTACCCG TCCATCAACT GCGAAGACCT TCATCCGGAA
ATTTCGGCCC TGATCGCGCC GGAACGAATC CCGCAACAGG TAATTAAACA AAATAGTACC
GTACTTGCGA AGGCCAACTT CGGGTTCGGC GATGTCAATG CCTGTGTTAT CTTAAAGACG
TTTTATCAGT AA
 
Protein sequence
MRNRVVITGL GVAAPNAVGI PSFLDAIQAG KSGIVFQPDL AELKFSCQIG GIPPVNEAIR 
NQYFSELQLR QLNSSGIIYG VIAGMEAWQN AGLPVATDEP DWDSGIVFGT GMLGVDKFRE
SIYKVDEGQV RRLGSTVVIQ TMTSGVSAFL GGMIGCGNQL SANSSACATG TEALLLGYER
IANGQAKRVL AGSCSDHGPY IWGGFDAMRV MPYQFNNDPE RASRPLSATA SGFVPGSGAG
ALVLESLESA LERKATIYAE VLGGHQNSGG QRGGGSMTAP NAQAVKRCIQ QAIQQAGVQP
DDIDIIDGHL TATIKDAAEV TAWCEALGRR GDDFPYINSL KSMVGHCLSA AGSIECVASV
LELHHGFVYP SINCEDLHPE ISALIAPERI PQQVIKQNST VLAKANFGFG DVNACVILKT
FYQ