| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3075 |
|---|
| Symbol | |
|---|
| ID | 8726827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3726364 |
|---|
| End bp | 3727350 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein |
|---|
| Protein accession | YP_003387885 |
|---|
| Protein GI | 284037955 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.698779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGC TCAAACGTAT TCTTACCTGG ACTGCGCTCA CGATAGTAGT ACTCGCTATT
GGCGGATTGA TTATTGCCTG GTTTGTTGAC TCCCGCCAGT CGGATCAGGA GTTGGCAGAG
GAATTTAAAG GCCAGCGTAT TCAGCCAACA GTCCATTATT ACCGGGTTAG CAACCGGCAT
TCAAACGGCA CCAGCCGCGA TGAAGCGCCC CGAACCATTC GGTTTATCGA AACACCGGCC
TCCCCGGCTG ATTCTGCTTT GCCGGTCGTA ATTTTTGTCC ACGGAGCCCC CAGTTCACTG
TCTTTCTTTA ACGCGTTTTT TAAAGATACG ACCCTGCTCA ACCGGGCTCG CCTGGTGGCT
GTCGACCGGC CGGGCTATGG TTACTCCGAT TACGGACGAG TGGAGACATC CATCATACGG
CAGGCCGAAC TACTGCAACC CCTCATCGAC CGCTACAAAA AAGCCCCTTA TCTGATGATC
GTGGGTTCGT CGTATGGCGG CTCGGTAACG GCGCGGCTGG CTATGAACAA TCCCGATTAT
GTCGACCATG TTGTGTTTGT TTCCTCGGCC CTGGGGCCGG GGCTTGAACG AACGTACCCC
ATTAGCTACT TCGCCGACAG CCCGCTTATC CACTGGGGCG TACCGCCATT ACTTCGGCTG
GCGAACGACG AAAAATTGGC TCACCGCCGT GCGCTGGAAG CCATTCTGCC CGACTGGCCT
AAAATTCGGG CTAACATTAC CATGCTCCAC GGCCAGCGGG ACGAACTGGT TTACCCAACC
AACGTTTCGT TTGCCCAGAA TCACCTGGTC AACGCGCGGG TAAAACAGTT TCTATTGCCC
GAAAACCGGC ACGACATTGT CTTCAACAAA CGGGAATACA TGACCGAAAT CATCCTGAAT
ATCCTGACGC AACGGGAAGT TAAGGAGACG GTTACGGCCA AGTCGATAGC CGTAAAAACG
AAATCGAACG ACACAGACCG CCTGTAA
|
|---|
| Protein sequence | MKLLKRILTW TALTIVVLAI GGLIIAWFVD SRQSDQELAE EFKGQRIQPT VHYYRVSNRH
SNGTSRDEAP RTIRFIETPA SPADSALPVV IFVHGAPSSL SFFNAFFKDT TLLNRARLVA
VDRPGYGYSD YGRVETSIIR QAELLQPLID RYKKAPYLMI VGSSYGGSVT ARLAMNNPDY
VDHVVFVSSA LGPGLERTYP ISYFADSPLI HWGVPPLLRL ANDEKLAHRR ALEAILPDWP
KIRANITMLH GQRDELVYPT NVSFAQNHLV NARVKQFLLP ENRHDIVFNK REYMTEIILN
ILTQREVKET VTAKSIAVKT KSNDTDRL
|
|---|
| |