Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3043 |
Symbol | |
ID | 8726795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3697606 |
End bp | 3698805 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Peptidoglycan-binding lysin domain protein |
Protein accession | YP_003387853 |
Protein GI | 284037923 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.592375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.198967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TTCCTCTTTA TATCCATCTG AGTCTGCTGG CGGGTATGGC ATTCACCCAG GTTCTGGCGG CCCGCCCGCC CTTGCCAACC AGCAAAACAG TTGCCGATTC GATAGGTGTT GAAAAGAAAG ATGGCAAACG GTTCATTCTG CATCGCGTTG ATGAAGGACA AACGTTGTTC GGTATCGCCC GTCGTTATAA GTGTTCCGTT GCCGACATCC GGTCTACAAA TCCAGAACTG AAAGATGGCG TCAAATACGG CCAGGTTGTT CGAATCCAGA TTCCGGACGG TGCCCTGACC CGTAAGGAAA AAAAAGTTAT CGACAAAGCG ATAAAGAAAC AGGAAAAGGA GGAAAAAAAG GACGCGAAAG TAGCCGCGAC CCCAAAGCCT AAAGAAATAA AACCGGCAAA ACAGGCAGAG AAAACCGTTA TCAGAAATGA TGATCCGGCA AAAGCGGGTA TCCATGTTGT TGAAACCGGA CAAACATTAT ACAGTCTGGC TGGTTGTTAT GGCGTCTCGC AGGCCGACAT TCGAAAATGG AATAACCTTC CGGGCAACAA TGTGCTCATC GGACAGGCAC TTATCGTTTC GGAAAAGGCG TACCAGGCGC GTATGCCTGC TACGCCAACC CCCGCAACAA CGTCTAAACC GGTTGATCCC CCCCGGCGTA CTGAACCGGT TGCGTTGACG CATACCGCTG GTCGGCCGGC AGAGTCCCAT AAATCCGAAT CCCGGCCAGC AGCACCACCG GCCGACACCA AACCGGAACA CCACGCGGAG ACACCGTCGG CTCCTGCTGC CACTAAACCG GTCGATAGCA AGCCCGCTGA CTCAGAAGCG AAAGCCACTG CCAAACCTGC CGACAAGCCA GTTGACGAAG TGGAACTGCC GCGGCCCGGC AATGATGCAC CCATGCCAAC GCGGGGTCGG CGGATTTCCA GCAGCGGGGT CGCCGAGATG ATTGAAGGAA ATGATGGCTC GGGCAAGTAC CTCGCCCTGC ACCGAACGGC TCCCATTGGC ACGCTCGTAC AAGTCCGGAA TGAGTTCAAT AACCAGAGTA TCTGGGTAAA AGTCATTGGC CGACTACCCG ACACGGGTGT CAATGACAAG ATCTTAATTA AATTGTCGGC GCAGGCCTTC GCGAAACTTT CGCCCGTAGA TCGACGTTTT CGGGCTGAGG TCAGTTACAT TGTTCGATAG
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Protein sequence | MKKFPLYIHL SLLAGMAFTQ VLAARPPLPT SKTVADSIGV EKKDGKRFIL HRVDEGQTLF GIARRYKCSV ADIRSTNPEL KDGVKYGQVV RIQIPDGALT RKEKKVIDKA IKKQEKEEKK DAKVAATPKP KEIKPAKQAE KTVIRNDDPA KAGIHVVETG QTLYSLAGCY GVSQADIRKW NNLPGNNVLI GQALIVSEKA YQARMPATPT PATTSKPVDP PRRTEPVALT HTAGRPAESH KSESRPAAPP ADTKPEHHAE TPSAPAATKP VDSKPADSEA KATAKPADKP VDEVELPRPG NDAPMPTRGR RISSSGVAEM IEGNDGSGKY LALHRTAPIG TLVQVRNEFN NQSIWVKVIG RLPDTGVNDK ILIKLSAQAF AKLSPVDRRF RAEVSYIVR
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