Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3028 |
Symbol | |
ID | 8726780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3663953 |
End bp | 3664633 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003387838 |
Protein GI | 284037908 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.166438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTCGA CGGAACCCGT TCTTACGCTT ACCCATGCCG ATATCTACCA GGGAACGAAG TTGGTATTGG GCGACGTATC CTTTCAGATT AACAAAGGCG ATTTTGTCTA TCTTATCGGC CGAACGGGTA GCGGGAAATC CTCTCTGCTT AAAACATTAT ACGCTGACCT CTGGCTTCAG AACGGAAAAG GGCTGGTGGC GGGGTACCCG CTGGATGCCC TCAAACCCCG TGATATACCG CAACTCAGGC GAAAAATAGG GATCGTCTTT CAGGACTTCC AGCTATTTTT TGACCGCTCG GTTGAAGACA ACCTTAAGTT CGTTCTGAAA GCAACAGGCT GGACGAACAA AACAGATATG AACAACCGCA TCGCCGAGGT TTTGATGCAG GTTGGACTGG GTACAGCCCA GAAGAAAATG CCCCACCAGC TTTCGGGGGG CGAGCAACAG CGGGTAGTGG TTGCCAGAGC CATGCTGAAC GAACCCCAGA TACTCATTGC CGATGAGCCT ACCGGCAATC TGGACCCCTC CGTGGCTGAC CAGATAATGA AAGTCTTTCA AAGCATTAAT AATGCGGGAA CCGCCATTCT AATGGCTACC CACAACTACG ACCTACTGCA TAAATATCCG GCCCGCGTGC TTCGGTGTCA GGATGGACAG GTGGTTGAGC TGAAAGGCTA G
|
Protein sequence | MFSTEPVLTL THADIYQGTK LVLGDVSFQI NKGDFVYLIG RTGSGKSSLL KTLYADLWLQ NGKGLVAGYP LDALKPRDIP QLRRKIGIVF QDFQLFFDRS VEDNLKFVLK ATGWTNKTDM NNRIAEVLMQ VGLGTAQKKM PHQLSGGEQQ RVVVARAMLN EPQILIADEP TGNLDPSVAD QIMKVFQSIN NAGTAILMAT HNYDLLHKYP ARVLRCQDGQ VVELKG
|
| |