Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2997 |
Symbol | |
ID | 8726748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3627004 |
End bp | 3629370 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Polyphosphate kinase |
Protein accession | YP_003387807 |
Protein GI | 284037877 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTATT CCCTAAACTC AAACCGAAAT ATATTGGGTA ATTTGGTTTC CCGTTTCACC AATAAACAGG CCAATACGCC TGCCCAGGGG ACAGATAAAA TGGCAAAAGT TAGCGAAAAG GTTACCAGCG TCATCGATCA GAGTAATTAC CTGAGTCGTG ATTTAAGTTG GCTCAAATTT AATGAGCGCG TTCTGGACCA GGCCCGTGAT ACGAAGCCAC CGCTAAGCAA TCGTACCCTT ATGGAGCGGC TGAAGTTTCT GGCTATTTCC GCTTCGAATA TGGACGAGTT CTTTATGATT CGTGTGGGTA GTCTGTATAA CTATCTCGAC TATCATAAAC AACGCGTCGA TTACTCAGGG CTGCGCGAAG TACCGTTTCG GAAAGCGCTG TATACAACCG CTCATAAGTT CTTCCGGGAA CAGCAAACCG TTTTTTCAGA ACAGCTATTA CCGCTTTTTG CTGAAAATGG CCTTCAGTTG CTAACGCATT CCAGCCTTAC TGCCGAAGAA CAGGCTGAAG CAACTAATTA CTTCGATCGG GCCATTTACC CCACGCTGAC GCCAATGCTG TATGATTACA CGCATACATT TCCGGTGTTG CTGGCTAAAG TGCTTATTTT CGGTGTTGTC ACCCAGAATC CGGACGACGT CGAGATCAAG AGTTTACGGG CTGAAGACGA AGACGAACGG CAACGGCTTT CGTTCGTCCA GATTCCGGCC AACCTTCCCC GTTTTTTGTC CTTTGAACGA GAGGATACTA TTGTTTTTAT CCCGATTGAA GAAATAGTCC GGCACAATAT CAAAAAACTG TACCGTAACG TCGAAATCTT GTCGGTGAAC CTGTTTCGCA TTACCCGAAA TGGTGATTTT ACACTGGATG AGAACGACGA CGATGAGGTT GATTTCATCG ATGAAGTCAG GCAGAAAATA AAAAACCGGC GCCTGGGCCG GGTTACCCGG GTTGAAATCG AAACCGAAGG CAGTGCTGCT GGCAGTCAAT CTACGATCAG TTCCCCCTGG ATGCTGAATC TGTTGAAGAA ACGCTGGGAA ATCGATGATT TGAACATTTT CGAATCGCAC ACCCTCCTCG ACTTTTCGTC CCTGTGGCAA ATCATCGGTA ATCCGGAATT TAAAGACGAC ATGCCCCTCC CCCACGCACC GGTGCAGCCA CTTGGGGTAG GCCGCGACAA AACCGATGAT ATTTTTGAGC TGATCAAGCA GCGTGATCTG CTGCTGCACC ATCCGTACAA CAATTTTGAA CCGGTACTTC AGTTGCTGGA ACAAGCGGCC GAAGATCCAA ATGTACTGGC TATCAAGATC ACGGTTTACC GCTTGGCCAA ACGCTCCCGC ATTACCGAAG CCCTGCTGAA AGCCGCCGAA AACGGCAAAC ACGTTTCTGT ACTGTTTGAA GTAAAGGCGC GTTTTGATGA GGAAAATAAC ATCCGGGAAG CCCAGCGGCT ACAGAAGGCG GGATGCTTCG TCATATATGG CATCAGTCGC TTTAAAACGC ATACCAAATT ACTGCTCGTT GTTCGAAATG AAGGCAGCCG CGTGGTGCGC TATGCCCATA TGGCTACGGG TAACTACAAC GAAGATACCT CGAAGCTCTA CACCGACATT GGGCTGCTCA CCACGAACGA AACCTATACG CACGACATCT CGGAGTTTTT CAACGTAATC ACAGGACACT CGGTACCCAA CGAATACCAA TACCTGATTA CGGCTCCCCG CGACATGCGT GAACAGTTGC TGCGACTAAT TCGCCTGGAG GCCGAAAACG CAAAACATGG CCTGCCAAGC GGCATCTGCA TTAAGGTCAA CTCGCTGGAA GACAAACTGG TTATTGACGA GCTGTACCAG GCGTCGCAGG CGGGCGTACC AATCCGGCTC ATTGTTCGAA GTATCTGTTG TTTGCGGCCT CATCGTGCCG GGCTCAGTGA CAATATTACG GTTCGTTCCA TTGTGGGTGA TTTTCTGGAG CATACCCGAA TTTATTACTT CCATAACAAC GGCGATCCGA AAGTATATGG AGGAAGCGCC GATGTAATGG TTCGTAGCTT CGACCGGCGC ATTGAATCGT TATTCTACCT GGCCGATCCA CGCGTAAAAC AGCAGGCAAT TTTAATCCTG AAATACAACC TTCGGGATAA TGTCAACGCT TACGAACTGA AAGAGGACGG CGATTTCAAG AAATGTGAAG TGCCAACCGG GGGCGAGCCC TTCAGCATCC ACCAGCGTTT CTTCGAAATT ACGGAAAAGG AAGTGATGGA TGCCCGCCTT TTCGACGGTG AGCTTAAGCC TGCAGAGGTG GCTCAAATTG AGGAAGAGTA TCAGGAAGGC GCCGAACGCG CTATTGCTAA TATTTAA
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Protein sequence | MRYSLNSNRN ILGNLVSRFT NKQANTPAQG TDKMAKVSEK VTSVIDQSNY LSRDLSWLKF NERVLDQARD TKPPLSNRTL MERLKFLAIS ASNMDEFFMI RVGSLYNYLD YHKQRVDYSG LREVPFRKAL YTTAHKFFRE QQTVFSEQLL PLFAENGLQL LTHSSLTAEE QAEATNYFDR AIYPTLTPML YDYTHTFPVL LAKVLIFGVV TQNPDDVEIK SLRAEDEDER QRLSFVQIPA NLPRFLSFER EDTIVFIPIE EIVRHNIKKL YRNVEILSVN LFRITRNGDF TLDENDDDEV DFIDEVRQKI KNRRLGRVTR VEIETEGSAA GSQSTISSPW MLNLLKKRWE IDDLNIFESH TLLDFSSLWQ IIGNPEFKDD MPLPHAPVQP LGVGRDKTDD IFELIKQRDL LLHHPYNNFE PVLQLLEQAA EDPNVLAIKI TVYRLAKRSR ITEALLKAAE NGKHVSVLFE VKARFDEENN IREAQRLQKA GCFVIYGISR FKTHTKLLLV VRNEGSRVVR YAHMATGNYN EDTSKLYTDI GLLTTNETYT HDISEFFNVI TGHSVPNEYQ YLITAPRDMR EQLLRLIRLE AENAKHGLPS GICIKVNSLE DKLVIDELYQ ASQAGVPIRL IVRSICCLRP HRAGLSDNIT VRSIVGDFLE HTRIYYFHNN GDPKVYGGSA DVMVRSFDRR IESLFYLADP RVKQQAILIL KYNLRDNVNA YELKEDGDFK KCEVPTGGEP FSIHQRFFEI TEKEVMDARL FDGELKPAEV AQIEEEYQEG AERAIANI
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