Gene Slin_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2997 
Symbol 
ID8726748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3627004 
End bp3629370 
Gene Length2367 bp 
Protein Length788 aa 
Translation table11 
GC content49% 
IMG OID 
ProductPolyphosphate kinase 
Protein accessionYP_003387807 
Protein GI284037877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTATT CCCTAAACTC AAACCGAAAT ATATTGGGTA ATTTGGTTTC CCGTTTCACC 
AATAAACAGG CCAATACGCC TGCCCAGGGG ACAGATAAAA TGGCAAAAGT TAGCGAAAAG
GTTACCAGCG TCATCGATCA GAGTAATTAC CTGAGTCGTG ATTTAAGTTG GCTCAAATTT
AATGAGCGCG TTCTGGACCA GGCCCGTGAT ACGAAGCCAC CGCTAAGCAA TCGTACCCTT
ATGGAGCGGC TGAAGTTTCT GGCTATTTCC GCTTCGAATA TGGACGAGTT CTTTATGATT
CGTGTGGGTA GTCTGTATAA CTATCTCGAC TATCATAAAC AACGCGTCGA TTACTCAGGG
CTGCGCGAAG TACCGTTTCG GAAAGCGCTG TATACAACCG CTCATAAGTT CTTCCGGGAA
CAGCAAACCG TTTTTTCAGA ACAGCTATTA CCGCTTTTTG CTGAAAATGG CCTTCAGTTG
CTAACGCATT CCAGCCTTAC TGCCGAAGAA CAGGCTGAAG CAACTAATTA CTTCGATCGG
GCCATTTACC CCACGCTGAC GCCAATGCTG TATGATTACA CGCATACATT TCCGGTGTTG
CTGGCTAAAG TGCTTATTTT CGGTGTTGTC ACCCAGAATC CGGACGACGT CGAGATCAAG
AGTTTACGGG CTGAAGACGA AGACGAACGG CAACGGCTTT CGTTCGTCCA GATTCCGGCC
AACCTTCCCC GTTTTTTGTC CTTTGAACGA GAGGATACTA TTGTTTTTAT CCCGATTGAA
GAAATAGTCC GGCACAATAT CAAAAAACTG TACCGTAACG TCGAAATCTT GTCGGTGAAC
CTGTTTCGCA TTACCCGAAA TGGTGATTTT ACACTGGATG AGAACGACGA CGATGAGGTT
GATTTCATCG ATGAAGTCAG GCAGAAAATA AAAAACCGGC GCCTGGGCCG GGTTACCCGG
GTTGAAATCG AAACCGAAGG CAGTGCTGCT GGCAGTCAAT CTACGATCAG TTCCCCCTGG
ATGCTGAATC TGTTGAAGAA ACGCTGGGAA ATCGATGATT TGAACATTTT CGAATCGCAC
ACCCTCCTCG ACTTTTCGTC CCTGTGGCAA ATCATCGGTA ATCCGGAATT TAAAGACGAC
ATGCCCCTCC CCCACGCACC GGTGCAGCCA CTTGGGGTAG GCCGCGACAA AACCGATGAT
ATTTTTGAGC TGATCAAGCA GCGTGATCTG CTGCTGCACC ATCCGTACAA CAATTTTGAA
CCGGTACTTC AGTTGCTGGA ACAAGCGGCC GAAGATCCAA ATGTACTGGC TATCAAGATC
ACGGTTTACC GCTTGGCCAA ACGCTCCCGC ATTACCGAAG CCCTGCTGAA AGCCGCCGAA
AACGGCAAAC ACGTTTCTGT ACTGTTTGAA GTAAAGGCGC GTTTTGATGA GGAAAATAAC
ATCCGGGAAG CCCAGCGGCT ACAGAAGGCG GGATGCTTCG TCATATATGG CATCAGTCGC
TTTAAAACGC ATACCAAATT ACTGCTCGTT GTTCGAAATG AAGGCAGCCG CGTGGTGCGC
TATGCCCATA TGGCTACGGG TAACTACAAC GAAGATACCT CGAAGCTCTA CACCGACATT
GGGCTGCTCA CCACGAACGA AACCTATACG CACGACATCT CGGAGTTTTT CAACGTAATC
ACAGGACACT CGGTACCCAA CGAATACCAA TACCTGATTA CGGCTCCCCG CGACATGCGT
GAACAGTTGC TGCGACTAAT TCGCCTGGAG GCCGAAAACG CAAAACATGG CCTGCCAAGC
GGCATCTGCA TTAAGGTCAA CTCGCTGGAA GACAAACTGG TTATTGACGA GCTGTACCAG
GCGTCGCAGG CGGGCGTACC AATCCGGCTC ATTGTTCGAA GTATCTGTTG TTTGCGGCCT
CATCGTGCCG GGCTCAGTGA CAATATTACG GTTCGTTCCA TTGTGGGTGA TTTTCTGGAG
CATACCCGAA TTTATTACTT CCATAACAAC GGCGATCCGA AAGTATATGG AGGAAGCGCC
GATGTAATGG TTCGTAGCTT CGACCGGCGC ATTGAATCGT TATTCTACCT GGCCGATCCA
CGCGTAAAAC AGCAGGCAAT TTTAATCCTG AAATACAACC TTCGGGATAA TGTCAACGCT
TACGAACTGA AAGAGGACGG CGATTTCAAG AAATGTGAAG TGCCAACCGG GGGCGAGCCC
TTCAGCATCC ACCAGCGTTT CTTCGAAATT ACGGAAAAGG AAGTGATGGA TGCCCGCCTT
TTCGACGGTG AGCTTAAGCC TGCAGAGGTG GCTCAAATTG AGGAAGAGTA TCAGGAAGGC
GCCGAACGCG CTATTGCTAA TATTTAA
 
Protein sequence
MRYSLNSNRN ILGNLVSRFT NKQANTPAQG TDKMAKVSEK VTSVIDQSNY LSRDLSWLKF 
NERVLDQARD TKPPLSNRTL MERLKFLAIS ASNMDEFFMI RVGSLYNYLD YHKQRVDYSG
LREVPFRKAL YTTAHKFFRE QQTVFSEQLL PLFAENGLQL LTHSSLTAEE QAEATNYFDR
AIYPTLTPML YDYTHTFPVL LAKVLIFGVV TQNPDDVEIK SLRAEDEDER QRLSFVQIPA
NLPRFLSFER EDTIVFIPIE EIVRHNIKKL YRNVEILSVN LFRITRNGDF TLDENDDDEV
DFIDEVRQKI KNRRLGRVTR VEIETEGSAA GSQSTISSPW MLNLLKKRWE IDDLNIFESH
TLLDFSSLWQ IIGNPEFKDD MPLPHAPVQP LGVGRDKTDD IFELIKQRDL LLHHPYNNFE
PVLQLLEQAA EDPNVLAIKI TVYRLAKRSR ITEALLKAAE NGKHVSVLFE VKARFDEENN
IREAQRLQKA GCFVIYGISR FKTHTKLLLV VRNEGSRVVR YAHMATGNYN EDTSKLYTDI
GLLTTNETYT HDISEFFNVI TGHSVPNEYQ YLITAPRDMR EQLLRLIRLE AENAKHGLPS
GICIKVNSLE DKLVIDELYQ ASQAGVPIRL IVRSICCLRP HRAGLSDNIT VRSIVGDFLE
HTRIYYFHNN GDPKVYGGSA DVMVRSFDRR IESLFYLADP RVKQQAILIL KYNLRDNVNA
YELKEDGDFK KCEVPTGGEP FSIHQRFFEI TEKEVMDARL FDGELKPAEV AQIEEEYQEG
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