Gene Slin_2976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2976 
Symbol 
ID8726727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3594782 
End bp3595495 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF72 
Protein accessionYP_003387787 
Protein GI284037857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.206183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG TTCTTCAAAT CGGTACCTGC GGTTTTGGCG TTCCTAAAGA CGTGTATGCC 
CAACAGTTTT CCAGCGTCGA GGTGCAGCAT ACTTTTTATC AGCCGCCACA ACTCGCAACC
CTGGCTCGTT GGCGCGATCA GGTGCCGACT GATTTCGAAT TTACGCTAAA GGCCTGGCAA
TTGATTACAC ATTCGGCGCA AAGTCCCACA TATAAACGAA TAAAAAAGCC ACTTACCGAC
GCCGAACGAG CCGAAGCGGG CTTTTTCCGG CCCACGCCGA CCGTTGAACA CGCCTGGCAG
GTGACGCGGC AGTGTGCGCA GGCACTTCGC GCCCGAACCG TGCTGTTCCA ATGCCCGGCC
AGCTTTACCC AAACACCGCA GCACATCGCG CAACTAACGC GTTTCTTCTC CGATATTGAC
CGGTCTGGGT TGACCTTTGC CTGGGAGCCC AGAGGCCCCT GGGATAAAGA CACGATTAAG
GGTTTATGCG AAGATCTGCA ACTATGGCAT GTGGTCGACC CGTTTGTTCA GGCCACCACC
ACGCCCGATC ACTGCTACTT TCGGCTGCAC GGCCGACAGG GGTGGCGATA TACGTATGAT
ATGCAGGAGC TTACGGAACT GGCTGAATTG GTACCGGATG ATCAACGGGC TTATGTTTTC
TTTAACAACA GCCAGATGAG ACAGGATGCG CTGGTTTTTA AGGGATTGCT GTAG
 
Protein sequence
MSEVLQIGTC GFGVPKDVYA QQFSSVEVQH TFYQPPQLAT LARWRDQVPT DFEFTLKAWQ 
LITHSAQSPT YKRIKKPLTD AERAEAGFFR PTPTVEHAWQ VTRQCAQALR ARTVLFQCPA
SFTQTPQHIA QLTRFFSDID RSGLTFAWEP RGPWDKDTIK GLCEDLQLWH VVDPFVQATT
TPDHCYFRLH GRQGWRYTYD MQELTELAEL VPDDQRAYVF FNNSQMRQDA LVFKGLL