Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2976 |
Symbol | |
ID | 8726727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3594782 |
End bp | 3595495 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF72 |
Protein accession | YP_003387787 |
Protein GI | 284037857 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.206183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAG TTCTTCAAAT CGGTACCTGC GGTTTTGGCG TTCCTAAAGA CGTGTATGCC CAACAGTTTT CCAGCGTCGA GGTGCAGCAT ACTTTTTATC AGCCGCCACA ACTCGCAACC CTGGCTCGTT GGCGCGATCA GGTGCCGACT GATTTCGAAT TTACGCTAAA GGCCTGGCAA TTGATTACAC ATTCGGCGCA AAGTCCCACA TATAAACGAA TAAAAAAGCC ACTTACCGAC GCCGAACGAG CCGAAGCGGG CTTTTTCCGG CCCACGCCGA CCGTTGAACA CGCCTGGCAG GTGACGCGGC AGTGTGCGCA GGCACTTCGC GCCCGAACCG TGCTGTTCCA ATGCCCGGCC AGCTTTACCC AAACACCGCA GCACATCGCG CAACTAACGC GTTTCTTCTC CGATATTGAC CGGTCTGGGT TGACCTTTGC CTGGGAGCCC AGAGGCCCCT GGGATAAAGA CACGATTAAG GGTTTATGCG AAGATCTGCA ACTATGGCAT GTGGTCGACC CGTTTGTTCA GGCCACCACC ACGCCCGATC ACTGCTACTT TCGGCTGCAC GGCCGACAGG GGTGGCGATA TACGTATGAT ATGCAGGAGC TTACGGAACT GGCTGAATTG GTACCGGATG ATCAACGGGC TTATGTTTTC TTTAACAACA GCCAGATGAG ACAGGATGCG CTGGTTTTTA AGGGATTGCT GTAG
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Protein sequence | MSEVLQIGTC GFGVPKDVYA QQFSSVEVQH TFYQPPQLAT LARWRDQVPT DFEFTLKAWQ LITHSAQSPT YKRIKKPLTD AERAEAGFFR PTPTVEHAWQ VTRQCAQALR ARTVLFQCPA SFTQTPQHIA QLTRFFSDID RSGLTFAWEP RGPWDKDTIK GLCEDLQLWH VVDPFVQATT TPDHCYFRLH GRQGWRYTYD MQELTELAEL VPDDQRAYVF FNNSQMRQDA LVFKGLL
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