Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2922 |
Symbol | |
ID | 8726673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3525807 |
End bp | 3526982 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Acyl-CoA dehydrogenase type 2 domain protein |
Protein accession | YP_003387734 |
Protein GI | 284037804 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGGTC CCACTACTAC CCTGGTAATA GATTCTATAC CAAAACCGCC GACGCGTATC GATTCAAGTC AGTTAACGGA GTTGCTCGCC CGGATTTATG CAGTTGCCGG CGAAACCGAC GACGAGAAAA AATTCCCGGA AAAAGCGTTC CAGTGGCTGG CAAACGCCGG TTTGCTGGCT GTCACGCTGC CCGGACATCA ACTTGACCAG CAACTACCCA GAACGACCGG CCTGTTGCAG TTATTGAAGC GAATCGGTGC GGCTAATCTG TCGGTTGGAC GGGTGTATGA AGGCCATATC AATGCTTTGA GCCTAATCCA GCATTATGCC AAACCAATGC AAAAAAAAAC ATGGTTTGCC GATGTAAATC AACATAACCG CTTGTTCAGC GTCTGGAACA CCCAGGCTAA CGACGGGGTA AAAATTCACT TTATTGGTAA TGGCCGGTAT CGGCTGGAGG GTTCTAAAAC CTTTTGCTCC GGAGCAGGGT GCATCCAGCG GCCACTCGTA ACGGGACAGT TGGTGGGCGC TCCGAAAGAG GGCTGGCAGA TGTGCATAAT TCCGACCGAG CGCGTATCGG AAATTCCGCA GGATGACCGG TTCTGGCAGC CCCTGGGAAT GCGGGCATCA ATCAGTTATA AGCTCGACTT TACCGGAGTT GAACTGGATG AAGAGGATTT GTTGGGGCAA CCCGACGACT ATTATCGACA ACCCTATTTC AGCGGGGGAG CGATCCGGTT TGCGGCTGTT CAACTGGGTG GGGCAGAGGC TCTATTTGAT GCAACACGGT CGTTTCTGGC ATCGATGGGC CGTACCGACG ATGCGTTTCA ACGGATGCGT CTGGCCGAAA TGGCCTGCCT GATTGAATCG GGGAATCAAT GGCTCAATAC CGCAGGCATG AAAGCCGATG AATGGCTAAG TAACGGAACC AACGCTGATA AACTAGTCGC TTACGCAAAC ATGACCCGGA CAAGTATTGA AGAAATCTGT CTACGGATGA TGCCTCTCGC CGAACGCTCG GTAGGGGCTC GTGGGCTGAT GCGCCCGCTG CCCTTCGAGC GAATTCACCG CGACCTGACG TTTTACCTCC GGCAACCCGC ACCCGATGCC ACTCTGATTG ATATTGGTCG ATTTGTTATT GATAACCAAG TGAATGCACA TGAACTCTGG GATTGA
|
Protein sequence | MEGPTTTLVI DSIPKPPTRI DSSQLTELLA RIYAVAGETD DEKKFPEKAF QWLANAGLLA VTLPGHQLDQ QLPRTTGLLQ LLKRIGAANL SVGRVYEGHI NALSLIQHYA KPMQKKTWFA DVNQHNRLFS VWNTQANDGV KIHFIGNGRY RLEGSKTFCS GAGCIQRPLV TGQLVGAPKE GWQMCIIPTE RVSEIPQDDR FWQPLGMRAS ISYKLDFTGV ELDEEDLLGQ PDDYYRQPYF SGGAIRFAAV QLGGAEALFD ATRSFLASMG RTDDAFQRMR LAEMACLIES GNQWLNTAGM KADEWLSNGT NADKLVAYAN MTRTSIEEIC LRMMPLAERS VGARGLMRPL PFERIHRDLT FYLRQPAPDA TLIDIGRFVI DNQVNAHELW D
|
| |