Gene Slin_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2922 
Symbol 
ID8726673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3525807 
End bp3526982 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content52% 
IMG OID 
ProductAcyl-CoA dehydrogenase type 2 domain protein 
Protein accessionYP_003387734 
Protein GI284037804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGTC CCACTACTAC CCTGGTAATA GATTCTATAC CAAAACCGCC GACGCGTATC 
GATTCAAGTC AGTTAACGGA GTTGCTCGCC CGGATTTATG CAGTTGCCGG CGAAACCGAC
GACGAGAAAA AATTCCCGGA AAAAGCGTTC CAGTGGCTGG CAAACGCCGG TTTGCTGGCT
GTCACGCTGC CCGGACATCA ACTTGACCAG CAACTACCCA GAACGACCGG CCTGTTGCAG
TTATTGAAGC GAATCGGTGC GGCTAATCTG TCGGTTGGAC GGGTGTATGA AGGCCATATC
AATGCTTTGA GCCTAATCCA GCATTATGCC AAACCAATGC AAAAAAAAAC ATGGTTTGCC
GATGTAAATC AACATAACCG CTTGTTCAGC GTCTGGAACA CCCAGGCTAA CGACGGGGTA
AAAATTCACT TTATTGGTAA TGGCCGGTAT CGGCTGGAGG GTTCTAAAAC CTTTTGCTCC
GGAGCAGGGT GCATCCAGCG GCCACTCGTA ACGGGACAGT TGGTGGGCGC TCCGAAAGAG
GGCTGGCAGA TGTGCATAAT TCCGACCGAG CGCGTATCGG AAATTCCGCA GGATGACCGG
TTCTGGCAGC CCCTGGGAAT GCGGGCATCA ATCAGTTATA AGCTCGACTT TACCGGAGTT
GAACTGGATG AAGAGGATTT GTTGGGGCAA CCCGACGACT ATTATCGACA ACCCTATTTC
AGCGGGGGAG CGATCCGGTT TGCGGCTGTT CAACTGGGTG GGGCAGAGGC TCTATTTGAT
GCAACACGGT CGTTTCTGGC ATCGATGGGC CGTACCGACG ATGCGTTTCA ACGGATGCGT
CTGGCCGAAA TGGCCTGCCT GATTGAATCG GGGAATCAAT GGCTCAATAC CGCAGGCATG
AAAGCCGATG AATGGCTAAG TAACGGAACC AACGCTGATA AACTAGTCGC TTACGCAAAC
ATGACCCGGA CAAGTATTGA AGAAATCTGT CTACGGATGA TGCCTCTCGC CGAACGCTCG
GTAGGGGCTC GTGGGCTGAT GCGCCCGCTG CCCTTCGAGC GAATTCACCG CGACCTGACG
TTTTACCTCC GGCAACCCGC ACCCGATGCC ACTCTGATTG ATATTGGTCG ATTTGTTATT
GATAACCAAG TGAATGCACA TGAACTCTGG GATTGA
 
Protein sequence
MEGPTTTLVI DSIPKPPTRI DSSQLTELLA RIYAVAGETD DEKKFPEKAF QWLANAGLLA 
VTLPGHQLDQ QLPRTTGLLQ LLKRIGAANL SVGRVYEGHI NALSLIQHYA KPMQKKTWFA
DVNQHNRLFS VWNTQANDGV KIHFIGNGRY RLEGSKTFCS GAGCIQRPLV TGQLVGAPKE
GWQMCIIPTE RVSEIPQDDR FWQPLGMRAS ISYKLDFTGV ELDEEDLLGQ PDDYYRQPYF
SGGAIRFAAV QLGGAEALFD ATRSFLASMG RTDDAFQRMR LAEMACLIES GNQWLNTAGM
KADEWLSNGT NADKLVAYAN MTRTSIEEIC LRMMPLAERS VGARGLMRPL PFERIHRDLT
FYLRQPAPDA TLIDIGRFVI DNQVNAHELW D