Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2875 |
Symbol | |
ID | 8726625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3473961 |
End bp | 3476492 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387688 |
Protein GI | 284037758 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.211795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAT TTTTACAGAT TTTCACTACG TGTAGCTTAC TCATGTCCGG CTTGTCGTTG TCGACCTCGG CCCAGAGTAC TTATGTAGTG ATGGGGCGGG TAACGGACGC AGCAACGGGC GAGGGGATTC CGTTTGCCAG TATTGCCCTG AAGGGAAAAA CGTCTGGCAC CACTTCCGAC GCAGACGGGC GCTATTCCCT TCGGCTCACT CAGTTAGCTG ACTCACTCAT CGTTTTAAGC CTGGGGTATC GAACAAGCGC TTATCCGCTT TTGCAGCAGG CCTCCCAAAC GATCAATGCA CGGCTTACGA CAACGGCTAC AAAACTGAAA GAAGTTAAAG TTTACGCTAA AGGGGGCGAC CCGGCTTATC GTGTTATGCG GGAAGCCCTC CGAAGGCGCG ATGAGTATAA CCCGGCGAAA ATGCTGGCTT ACCAGTACGA GAGTTATACC AAGGTTGAAG GGTATATCAA CAACTTTGCC CAGAAGCGTA AAAACAACAA GAAGCCGGGA CCTATTGGTC GACTGTTGGG TAAGCTACCC GCTATTACGG ATGAAAACGG GCAACCGGCC GTACCCGTAT TTATTTCGGA AACGGTATCC AATTTTTACG CCCGTTCCCA GCCGGAAAAA ATGAAGGAGC ATGTGCTGAA ATCGCATGTA ACAGGGGTAG GTGTTAGCGA TGGTGGTCTT ATTTCTCAGC TAACGGGTGC CTCGTTTCAA CAGTACAATT TTTACCGGAA CTCCCTCAAT ATCCTACAAA AAGACATCCC CTCGCCTATT GGCAGCCAGT GGGAAACGAT CTACCGGTTC CGGCTAAAAG ACACGATCGT TCTGAACAAC GCCGTGTGCT TTGCCATTGA GTTTACCCCC AAACGGACAA GCGATCTGGC ATTCAACGGA ACCCTCCTGA TCGACACGCT CCATTTCTCG CTGGCACAGA TGGACGCCCG GGTCGACAAG CGGGCGAACA TCAACTTTGT CGATGAGCTT CACATTGAGC AGGATTGGGA AACTACCCCT TCGGGGTTAC GCTTCCCGAC CCAGACGCAG GTGATGATTG ATACCGACGA GCCAACGCCC CGTGCACCGG GTGCTTTGAT TCGTTTCTTC ACTTCGGCCA GTAATATTGT TGAAAACCAG CCGAAGGAAG TCGGTTTCTA CGATCCATCT ATTGAACTTT CGGACGATTA TAAAGATACC GATGCCGCTT TCTGGCAGCG CGTCAGACCG GCCTCCCTCT CCCCTCGCGA ATACCGGGCT ATGGAAGTTG TCGACTCGGT TCGGAACGTA CCGTTTATGA AAGTGGCCGG TGAGATTATC AAGCTGGGTG TGATCGGGTA TAAACCGCTT GGAAAATTAA ATGTCGAGCT TGGTCCGCTT CTGTACTCAT ACGCCAGCAA TACGATTGAA GGGCAGCGAT TCCGGCTTGG GTTGCGAACA AATACCGGCT TCAGCCGAAA GTGGCTGCTG AGTGGTTATG TGGCCTACGG CACGCAGGAT GAAAAGCTGA AATACAGTGC TAATATCGAG TATATCCTCA GCCGAAAACC GTGGACAGTC ATCGGCGTCC GGCAGAGTTA TGACCTGGAG CGTATTGGCG TATCGGCCGA CAACATCGGC AATAACTCCT TATTTGGGGC TTATTCACGT TTCGGCACTA TTCGGCGGGC GTATTTCCAG GAAGAAAAGC TGGCCTATTT CCGACGCGAA ATGGGCCGTG GTTTCACGCA GACGGTGGCC GTGCGCAACC GTAGCTTTGA GCCGTTGTTC CCGTTTGCCT TTCAACCCCA GTTGCATGAT CAGGACCAGA CGGTTCGGAG CAGCTACCAG ATTACGGAAT TGATTTCGGA AACCCGTTTT GCCCCTGACG AGGTCATTCT GCAAAACGAC AATGTACGGG TGAGCACCGG CGCCATCCGA AAACCTATTT TCACCCTTCG GTACACGCTT GGATTACGGA ATGTTCTGGG CAGCGATTTT ACGTACCAGC GTATTGCCCT TACCATGAAG CATTCCTTCC GTATGGGCGT TCTGGGCCGG TCTTATTACA CGATTGGCGC CGGTATTATT CCTTCAACGG TTCCGTATCC TTTGTTATAC ACGCCCCTGG GTAATGAATC GTCGTTTTAC GTTGGGAATG CCTACAACCT CATGAACTAC TTCGAGTTCA TTTGCGACCG CTGGGCCACG GTTCAGTACG AGCACAACTT TGGCGGACTG CTCTTTAATC GACTTCCGCT GCTTCGTCAG CTTAAATGGC GCGAACTAGT TACCGCAAAA GTGCTTGTGG GGGGCGTATC TTCCAGCAAT CTGGCCGTTA TTCCCGCTGT TGATGGAAAT GGGCAGTCGG TTGAAAGTTT CAGCTCGTTA ACCCGAACGC CTTATATTGA AGTGGGCTAT GGCATCGACA ACATCTTTAA AGTGCTCCGT GTTGATGCAA TCCATCGGCT TACCTACCGC GACAATATTG GTCGTACCGG CATTCCCGTC ACCCCGTTTG CCATTAAAGT ATCGGGCTGG CTGGCTTTTT AG
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Protein sequence | MKQFLQIFTT CSLLMSGLSL STSAQSTYVV MGRVTDAATG EGIPFASIAL KGKTSGTTSD ADGRYSLRLT QLADSLIVLS LGYRTSAYPL LQQASQTINA RLTTTATKLK EVKVYAKGGD PAYRVMREAL RRRDEYNPAK MLAYQYESYT KVEGYINNFA QKRKNNKKPG PIGRLLGKLP AITDENGQPA VPVFISETVS NFYARSQPEK MKEHVLKSHV TGVGVSDGGL ISQLTGASFQ QYNFYRNSLN ILQKDIPSPI GSQWETIYRF RLKDTIVLNN AVCFAIEFTP KRTSDLAFNG TLLIDTLHFS LAQMDARVDK RANINFVDEL HIEQDWETTP SGLRFPTQTQ VMIDTDEPTP RAPGALIRFF TSASNIVENQ PKEVGFYDPS IELSDDYKDT DAAFWQRVRP ASLSPREYRA MEVVDSVRNV PFMKVAGEII KLGVIGYKPL GKLNVELGPL LYSYASNTIE GQRFRLGLRT NTGFSRKWLL SGYVAYGTQD EKLKYSANIE YILSRKPWTV IGVRQSYDLE RIGVSADNIG NNSLFGAYSR FGTIRRAYFQ EEKLAYFRRE MGRGFTQTVA VRNRSFEPLF PFAFQPQLHD QDQTVRSSYQ ITELISETRF APDEVILQND NVRVSTGAIR KPIFTLRYTL GLRNVLGSDF TYQRIALTMK HSFRMGVLGR SYYTIGAGII PSTVPYPLLY TPLGNESSFY VGNAYNLMNY FEFICDRWAT VQYEHNFGGL LFNRLPLLRQ LKWRELVTAK VLVGGVSSSN LAVIPAVDGN GQSVESFSSL TRTPYIEVGY GIDNIFKVLR VDAIHRLTYR DNIGRTGIPV TPFAIKVSGW LAF
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