| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2849 |
|---|
| Symbol | |
|---|
| ID | 8726599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3442215 |
|---|
| End bp | 3442604 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | HEPN domain protein |
|---|
| Protein accession | YP_003387662 |
|---|
| Protein GI | 284037732 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.578106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.335938 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAC AGGTAGACCG GTTTCTCGAG CATGCTAAAG ATGCCCTCGA CGATGCCAAT
TACTTACATC AGGACGGCCG CATTTTAGCG CTGGCGAACA GGGCTTATTA TGCGATATTT
TATTGCATAT GCGCCTTACT GGCTACAGAA GGAATAACGA CGAAGAAACA CCAGGCTTCC
AGAGCTAAAT TCAGCGAATT CTTTGTTAAA ACAGGTCGAT TTGATGTGCA GGCCAGTAAG
ATTGTTGGTA ATAGTTTTGC CGCTCGTCAA TCGGCTGACT ATGATATGGA GGCTTTTCTG
AGTGAAGCTG AGGCACAATT GCTACTCGAG GATTCCCGGA CTTTCTATGA GCAGACCATC
GCTTATTTTG CTCAAAATCC GATTGAGTAG
|
|---|
| Protein sequence | MKEQVDRFLE HAKDALDDAN YLHQDGRILA LANRAYYAIF YCICALLATE GITTKKHQAS
RAKFSEFFVK TGRFDVQASK IVGNSFAARQ SADYDMEAFL SEAEAQLLLE DSRTFYEQTI
AYFAQNPIE
|
|---|
| |