Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2800 |
Symbol | |
ID | 8726550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3388643 |
End bp | 3389401 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | 3-deoxy-D-manno- octulosonatecytidylyltransferase |
Protein accession | YP_003387614 |
Protein GI | 284037684 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATCG GAATAATCCC CGCCCGCTAC GGCTCCTCCC GTTTTCCCGG CAAACCCCTG GCCGACATTA GGGGAAAATC CATGATTCAG CGGGTGCTCG AACAGGCGAA TCAGGCCGAG TCGCTGGCAA AAGTAGTGGT AGCAACGGAC GACGACCGCA TTGCCGAAGC CGTTCGCCGA CTTGGTTACG AAGCCGTTAT GACCCGCGTT GATCACCCCA GCGGTACCGA CAGGTGTTGG GAAGCTTACG ACCGACTGGT GGCAGACGGT GTGATTGTCG GCAATTCGAC TGATTACGTA CTGAATATTC AGGGGGATGA GCCCTTTCTG GACCCGGCTC AGATTGACGA ACTGGCCGCT ATTCTGGACG GTTCCGTCGA ACTGGCTACG CAGATGGCAA CCGTCGATTC GGCGGAGATG CTGCATGACC CCAAGGAGGC TAAAATTGTT ATCAACAGCC AGAACGAAGC CTTGTATTTT AGTCGTTCGG CGGTGCCTTA TCTGTGGGGC GTTGAACCAG ACCAGTGGCA CGCAAAGCAC GCATATCACC GCCATGTGGG CTTGTATGCC TACCGCGTGG ATGTACTGGA AAGGTTAACT CAGTTGCCTC CGTCGCCCCT CGAACGGGCG GAGTCGCTGG AGCAGTTGCG CTGGCTGGAA GCGGGGTATC GAATCAAACT GGTTCCCACA AACTTTCAGA CGCCAAGCGT CGATAGCCCG GAGGATATTG AGAAGATTCT GAAAAGCGGA GTGGCGTAG
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Protein sequence | MIIGIIPARY GSSRFPGKPL ADIRGKSMIQ RVLEQANQAE SLAKVVVATD DDRIAEAVRR LGYEAVMTRV DHPSGTDRCW EAYDRLVADG VIVGNSTDYV LNIQGDEPFL DPAQIDELAA ILDGSVELAT QMATVDSAEM LHDPKEAKIV INSQNEALYF SRSAVPYLWG VEPDQWHAKH AYHRHVGLYA YRVDVLERLT QLPPSPLERA ESLEQLRWLE AGYRIKLVPT NFQTPSVDSP EDIEKILKSG VA
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