Gene Slin_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2800 
Symbol 
ID8726550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3388643 
End bp3389401 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID 
Product3-deoxy-D-manno- octulosonatecytidylyltransferase 
Protein accessionYP_003387614 
Protein GI284037684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATCG GAATAATCCC CGCCCGCTAC GGCTCCTCCC GTTTTCCCGG CAAACCCCTG 
GCCGACATTA GGGGAAAATC CATGATTCAG CGGGTGCTCG AACAGGCGAA TCAGGCCGAG
TCGCTGGCAA AAGTAGTGGT AGCAACGGAC GACGACCGCA TTGCCGAAGC CGTTCGCCGA
CTTGGTTACG AAGCCGTTAT GACCCGCGTT GATCACCCCA GCGGTACCGA CAGGTGTTGG
GAAGCTTACG ACCGACTGGT GGCAGACGGT GTGATTGTCG GCAATTCGAC TGATTACGTA
CTGAATATTC AGGGGGATGA GCCCTTTCTG GACCCGGCTC AGATTGACGA ACTGGCCGCT
ATTCTGGACG GTTCCGTCGA ACTGGCTACG CAGATGGCAA CCGTCGATTC GGCGGAGATG
CTGCATGACC CCAAGGAGGC TAAAATTGTT ATCAACAGCC AGAACGAAGC CTTGTATTTT
AGTCGTTCGG CGGTGCCTTA TCTGTGGGGC GTTGAACCAG ACCAGTGGCA CGCAAAGCAC
GCATATCACC GCCATGTGGG CTTGTATGCC TACCGCGTGG ATGTACTGGA AAGGTTAACT
CAGTTGCCTC CGTCGCCCCT CGAACGGGCG GAGTCGCTGG AGCAGTTGCG CTGGCTGGAA
GCGGGGTATC GAATCAAACT GGTTCCCACA AACTTTCAGA CGCCAAGCGT CGATAGCCCG
GAGGATATTG AGAAGATTCT GAAAAGCGGA GTGGCGTAG
 
Protein sequence
MIIGIIPARY GSSRFPGKPL ADIRGKSMIQ RVLEQANQAE SLAKVVVATD DDRIAEAVRR 
LGYEAVMTRV DHPSGTDRCW EAYDRLVADG VIVGNSTDYV LNIQGDEPFL DPAQIDELAA
ILDGSVELAT QMATVDSAEM LHDPKEAKIV INSQNEALYF SRSAVPYLWG VEPDQWHAKH
AYHRHVGLYA YRVDVLERLT QLPPSPLERA ESLEQLRWLE AGYRIKLVPT NFQTPSVDSP
EDIEKILKSG VA