Gene Slin_2749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2749 
Symbol 
ID8726499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3323568 
End bp3324464 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content50% 
IMG OID 
ProductNmrA family protein 
Protein accessionYP_003387563 
Protein GI284037633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000742781 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAGA CAATTGTAGT GTTCGGTGCC ACCGGCAATT TAGGAAACCG GATTGTGCGT 
GAACTAGTAA AAAGAGGGGC GGCCGTACGG GCCATTGTGC GAACGGCCAC CGATGCCGAA
AAAATAAGAA CACTGGAGCA ACTGGGGGCC ACCGTTGAGG AAACCGATAT GAACAGCGTC
GATGCGCTTG CCAAAGCGAG TTCGGGTGCC GGTTGCGTGG TGTCGGCGCT TGCGGGTTTG
GGCGATGTAA TTGTCGATTT ACAGAAACGA ATTCTGGATG GCGCCCTGCA AGCGGGTGTT
CCCCGGTTTA TCCCTTCCGA TTTCTGCACC GATTACACGG ATCTGGTACC GGGCGAAAAC
AGGAATTTTG ATTTGCGAAG AGCCTTTCGG GACTATCTCG ATACTACGTC CATACAAGCC
TCGTCCATTT TCAACGGTGC TTTTGCTGAT ATCCTTCAAT ACAACACACC GGTTTTAAAT
CTGAAAGAAA AGAGCATTGG TTACTGGGGC GATAAGGCTG ACTGGCCACT GGATTTCACC
ACGATGGACG ATACGGCGGC CTTTACAGCC GAAGTAGCTT TGGACGACGA AGCCCCCAGA
AATTTACAGA TTGCCAGTTT TCAGGTCAGC CCTGCGATGC TGTGGCAGGA CGTGAAAGCG
GCCACGGGTC AGGAATTCAG ACTTCATCAG CTGTCAAGTC TTGAAGATTT TGCTCAGTTT
ATACAACATC AACGAGCCGC TTACCCTGCG GGAGAAAACG AACTGTACGC CAAATGGCAG
CAGGGACAGT ATATGTATTC AATGTTCACA ACGCACCATA CGCACGTAGC CAACGGACGC
TATAAAAACC TCACCTGGAC TACAAGCCTA GATTTTATAA AGTCATTTGT TCAATAA
 
Protein sequence
MKKTIVVFGA TGNLGNRIVR ELVKRGAAVR AIVRTATDAE KIRTLEQLGA TVEETDMNSV 
DALAKASSGA GCVVSALAGL GDVIVDLQKR ILDGALQAGV PRFIPSDFCT DYTDLVPGEN
RNFDLRRAFR DYLDTTSIQA SSIFNGAFAD ILQYNTPVLN LKEKSIGYWG DKADWPLDFT
TMDDTAAFTA EVALDDEAPR NLQIASFQVS PAMLWQDVKA ATGQEFRLHQ LSSLEDFAQF
IQHQRAAYPA GENELYAKWQ QGQYMYSMFT THHTHVANGR YKNLTWTTSL DFIKSFVQ