Gene Slin_2739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2739 
Symbol 
ID8726489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3312103 
End bp3312924 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387553 
Protein GI284037623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000175663 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000119855 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAGGC ACGGGGTCAA CCCCGCGCCA GCGTCACAGC TACAGATACT GCAACAACTT 
ATCTTGATGA CGTATTTCGT TAAATCTGAT TCCATCGTTC GCCAGATTTG GGGTGATGCC
GATGTGATAT TATTGGTCTT TGCCGGTTCT GCGGCAGAGT TCGCGCTGAA TCGAGCGGTA
GACTGGCTCT TCTTCACGGG CAAGCTCCCC GCCGATCCCA TCGCCCGCTT ATTCTCGACC
GTTCGGTACG CGCAGGAGAT TGTTTTTGCC CCCGAAGCCA AAGCCCGCGA AGCAATTGCC
CGCATGAGCG CCATTCACGG GGGCGTTGAG CAGAAACGTG GTTACCAGAT ACCCGACTGG
GCCTACCGCG ATGTGCTGTA TATGCTCATC GACTACTCCA TGCGCTCCTT CGAAACACTG
CACCGCCCAT TAACAAATCC CGAAAAAGAA GAAGTCTTCG GTACCTTTCG GGAAGTTGGC
GCGGGCATGC ACGTACCTGA CCTACCCAGT ACATTTTCCG ATTGGCAAAT CGACCGGGAA
GCGCATTTGA ATCGAGATCT GGTGCGGAGT GAATTTACAG ATAAACTGTT CCAACGGTAT
CGCGAGCAGT TGGGCAACTG GCGCTATGAT CTGCTCCGGC AGGCACAGGC TGTTCTTGTC
CCGAAGCAGG TTAGCCAGCG GCTGGCTTTA CCCGCGAAAC CCGTATTGGC TTATTCAATG
GGAGCCTATA AAATCCTGAA TACGCTTGGC CTGCGGTCGT TAGTTCAGCG TATATTATTA
CCCACTGCTT ATCTGGAACA GATTCGGGGG TTGGATCGGT GA
 
Protein sequence
MNRHGVNPAP ASQLQILQQL ILMTYFVKSD SIVRQIWGDA DVILLVFAGS AAEFALNRAV 
DWLFFTGKLP ADPIARLFST VRYAQEIVFA PEAKAREAIA RMSAIHGGVE QKRGYQIPDW
AYRDVLYMLI DYSMRSFETL HRPLTNPEKE EVFGTFREVG AGMHVPDLPS TFSDWQIDRE
AHLNRDLVRS EFTDKLFQRY REQLGNWRYD LLRQAQAVLV PKQVSQRLAL PAKPVLAYSM
GAYKILNTLG LRSLVQRILL PTAYLEQIRG LDR