| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2687 |
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| Symbol | |
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| ID | 8726437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3252495 |
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| End bp | 3254528 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003387502 |
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| Protein GI | 284037572 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.547616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.221922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTTT TTAACAAGCG TTTTTCGTAC CACTATCTGG TCCTTTCAAC GCTTACGCTG
GCTACTTCGG GCGTGCTGGC CCAGAAACCA ACGCAGCCTG CTCTAGGCTC GCGGTCGGTC
AAACCACTAA CCGTTAACGG CTTTTCATTC AAAGACCTGA ATAAAAACGG AAAACTTGAC
AAATACGAAG ACTGGCGCTT ACCCACCGAA CAGCGCGTAC AGGATTTGAT TGGCCAGATG
ACCCTTGATG AAAAGATAGG CTTCATGCTG ATCAGCACAT CGCGAATGGC CGGCGATTTT
TCGTTTCAGC AGGGGGCTCC AAAAGCCGAA ATCACAAGTG GCTTTAATGA AGAAGACCAG
GTTCAGAGCA TGAATATGTT CACCCGGAAG CCACTCCCCT ACCCGATGAT GATGGCCGCC
GGAACAACCA AAGCCGTAAC GCAGAACCAG CTACGCCATT TTATTCTGCG GGCCAACACG
TCGGCGAAAA CCATGGCCGA ATGGCATAAC AATTTACAGG CGCTCTGCGA AAACTCCCGT
CTGGGCATTC CGGCTATTGT AGCGTCCAAC CCGAGAAATC ACATCACCAC CGATGCCGCT
GTTGGGCTTA GCGTTGGCAC AACGGTATTC TCAAAGTGGC CCGGCGAATT GGGTCTGGCG
GCCATGCGCG ACTTAAAACT TACCCGCGAA TTTGCCGACA TTGCCCGGCA GGAATGGGCG
GCTGTGGGGC TGCGCAAAGG CTATCAGTAC ATGGCCGACT TAGCAACCGA ACCGCGCTGG
CAGCGTATTG AAGGCACATT TGGCGAAGAT GCCGATCTAG CCGCCAACAT GACCCGCGAA
ATAGTACTCG GCTTTCAGGG ACCCAAGCTG GGCCTCCACT CCGTAGGACT TACCACCAAG
CACTTCCCCG GTGGCGGACC GCAGGTAGAG GGGCAGGACC CGCATTTCGA CTGGGGAAAA
GATCAGCATT ACCCCGGCAA CATGTTCGAG TATCACCTCA AGCCATTTCA GGCCGCCATT
GATGCCGGCA CATCGTCCAT CATGCCTTAC TACGCCAAAC CCATCGGCAC AAAATATGAA
GAGATAGCTT TTGCTTATAA TAAAGCCATT ATCAAAGATT TACTTCGCGG CAAAATGGGC
TTTCAGGGCA TTATCAACTC CGACACGGGG CCTATTGAAA TGATGCCTTG GGGCGTTGAG
AAGTTAAGCA TCGAGGAACG ATACCAGAAG GCTATCGAGT GCGGAGTTGA TTTGTTTTCC
GGTTCTGCCG ATCCCTCGCT GCTGATGTCG ACCGTAAAAA AAGGACTCGT GACTGAAAAG
CGGATCAACG AATCCGTAGC CCGGTTACTG CGTGAGGAAT TCGCGCTGGG CCTGTTTGAA
AACCCATACG TCGACCCGGA GGTTGCACAG AAAACGGTTG GAAAACCCGA GTTTCAGCAA
CGGGCCGATC TTGCTTTCCG GAAATCCATT GTGCTGCTGC GCAATTCGGG AAAACTGCTT
CCGCTGGCCC CAAAAACCAA AGTCTTTATT GAGTCATACT ACGACAATGG CCGCTCTAAA
GAGCCTATTA CGGTAATCAA ACCTGCAACG AACAACTGGA ATCTGGAGTT TGTCGGTAGC
AAAGAAGAAG CCGATGTTGT GGTGCTGATG CTGACGCCCA GCAGCGGTAG TTTATTCAGC
TCGAACGGCG GGCCAATTGA GTTGCAACTG TCAAAAAACA AGATCGACGT AAAGCACGTC
AATGAAGTAA CCAGTCAGAA ACCAACCGTT GTCCTGATCA ATTACACGAG TCCGTGGGTG
ATCGACGAAA TTGACAATCC AAACCTCAAA ACGGTACTGG CAACGTTTGG CACCACCCCC
GACGCCATTC TGGACGTGCT GAGCGGGAAG TTCAACCCGA CCGGCAAGAT GCCGTTCAGC
ACTCCCGTTT CCCGACAGGC CGTTCTCGAC AACCAATCCG ACGTGCCGGG CCATATGAAG
CAAAAAGGCT ATGCGCTGTT CACCTTTGGC GATGGACTGA GCTACCCGAA CTAA
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| Protein sequence | MHLFNKRFSY HYLVLSTLTL ATSGVLAQKP TQPALGSRSV KPLTVNGFSF KDLNKNGKLD
KYEDWRLPTE QRVQDLIGQM TLDEKIGFML ISTSRMAGDF SFQQGAPKAE ITSGFNEEDQ
VQSMNMFTRK PLPYPMMMAA GTTKAVTQNQ LRHFILRANT SAKTMAEWHN NLQALCENSR
LGIPAIVASN PRNHITTDAA VGLSVGTTVF SKWPGELGLA AMRDLKLTRE FADIARQEWA
AVGLRKGYQY MADLATEPRW QRIEGTFGED ADLAANMTRE IVLGFQGPKL GLHSVGLTTK
HFPGGGPQVE GQDPHFDWGK DQHYPGNMFE YHLKPFQAAI DAGTSSIMPY YAKPIGTKYE
EIAFAYNKAI IKDLLRGKMG FQGIINSDTG PIEMMPWGVE KLSIEERYQK AIECGVDLFS
GSADPSLLMS TVKKGLVTEK RINESVARLL REEFALGLFE NPYVDPEVAQ KTVGKPEFQQ
RADLAFRKSI VLLRNSGKLL PLAPKTKVFI ESYYDNGRSK EPITVIKPAT NNWNLEFVGS
KEEADVVVLM LTPSSGSLFS SNGGPIELQL SKNKIDVKHV NEVTSQKPTV VLINYTSPWV
IDEIDNPNLK TVLATFGTTP DAILDVLSGK FNPTGKMPFS TPVSRQAVLD NQSDVPGHMK
QKGYALFTFG DGLSYPN
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