Gene Slin_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2685 
Symbol 
ID8726435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3250028 
End bp3251092 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387500 
Protein GI284037570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.282963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.122648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAC CCCTACTGTT GGCTTGTTTA CTGCTACTGG CAGCACTTAC CCCACCTAGT 
ATCGACTCAC TTAAACTGAA TCAGATTCAA TGCATTGGTT CGCACAACAG CTACAAACAG
GCAATTGACC CTGCGCTATT CGCCCTGCTG TCCCGAACGG ATTCACTGCG GTTTAAAGCC
ATCGAGTATA GCCACATTAG CCTGACCGAC CAGCTTAATC TGGGCTTGCA AAATCTTGAA
ATCGATGTTT ATGCCGACGC AAAGGGGGGT AAATATGCTC ATCCTATGGG GCTTAAACTC
GCCAAAAATC AACAACCGTA TGATGAAGCC GGGGTTATGA ATGAACCCGG TTTTAAGGTA
TTTCACATTC AGGATATTGA CTTTAGAAGT AATTCGCCGA CGTTTAAAGG CTGCCTGGCC
GAACTCAAAC GCTGGTCGGA TGCCCATCCT GCTCATTATC CGGTATTCAT CACGATGAAC
GCCAAAGACG ACACGATCCG GAGAGCGGGC TTCACCCTAC CCGAACCGTT CACGGCCTCG
GTACTAAATC AATTGGATAG TGTGATTCTG GCGGGTTTGG GTCGTTCCAA GCTCATCAGG
CCCGATGATG TTCGGGGCAA CAAGCCAACG CTGGAAGCGG CCGTGCTGGC AGGAAACTGG
CCTACCCTTC AAGCATCGAA GGGGAAATTC CTGTTTGTTC TCGACGAGAC CGGGACCAAA
CGGTCGGCGT ATATAGCGGG GCACCCATCG CTCAAAAACC GCGTCCTGTT TACCAATTCA
GAACCGGCAA CGCCTGAAGC CGCGTTTCTG ATTCTCAATA ACTCCATCGA AGAGCAAAGT
CAGATTCAGG CAATGGTTAA AAAAGGATAT CTGGTCCGCA CCCGCGCCGA TTCCGATACC
CGGCAGGCCC GCAGCAACGA CAAACGTAAT TTCGACGCAG CCTGCCAGTC GGGAGCCCAG
ATCATCACGA CGGATTATTA CGCAAAAAGC CAGTTCTTTC CGTCAGATTA CATCATCAGC
TTTGCCAACG GTACCTACCT ACGACCCAAC CCGATAATGC ACTAA
 
Protein sequence
MKIPLLLACL LLLAALTPPS IDSLKLNQIQ CIGSHNSYKQ AIDPALFALL SRTDSLRFKA 
IEYSHISLTD QLNLGLQNLE IDVYADAKGG KYAHPMGLKL AKNQQPYDEA GVMNEPGFKV
FHIQDIDFRS NSPTFKGCLA ELKRWSDAHP AHYPVFITMN AKDDTIRRAG FTLPEPFTAS
VLNQLDSVIL AGLGRSKLIR PDDVRGNKPT LEAAVLAGNW PTLQASKGKF LFVLDETGTK
RSAYIAGHPS LKNRVLFTNS EPATPEAAFL ILNNSIEEQS QIQAMVKKGY LVRTRADSDT
RQARSNDKRN FDAACQSGAQ IITTDYYAKS QFFPSDYIIS FANGTYLRPN PIMH