Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2683 |
Symbol | |
ID | 8726433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3247801 |
End bp | 3249498 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | gamma-glutamyltransferase |
Protein accession | YP_003387498 |
Protein GI | 284037568 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.186681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.206035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CTGTACTCTC GCTCCTCTTT CTGGCTTCGC TCGTCAACAA CGTTCTGGCT CAGGATAGGC TCAGCGGCAA GTCATTCGCT ACACGCGCCG TAGTAATGGC TCGTCATGGC ATGGCCTGTA CCTCACACCC GCTTTCAACT CAAGCTGCTA TTGACGTGCT GCGCTCCGGC GGCAATGCGA TCGATGCCGC GATTGCCGCC AACGCCATGG AAGGGCTGGT GGAGCCGCAC GTCAACGGCA TTGGCGGAGA CCTGTTCGCT ATTGTGTGGG ATGCCAAAAC CAAAAAACTG TATGGACTCA ATGCCTCGGG GCGGTCGCCT TATACGCTTA CCCTGGCGGA GTTTCAAAAA AGGGGGCTCA CACATATTCC GTCCGATGGC CCCCTGCCCG TGTCGGTGCC CGGTTGCGTA GACGGCTGGT TTGAACTGCA CAAGCGGTTC GGCAAAGCAC CTATGACCAG CATTTTAGCG CACGCCATCC GTTACGCGCG CGAAGGCTAC CCCGTTCACG ACGAAGCCGC CTTTTACTGG CCGTCGATGA TTGCGCGCTT CGGTAAGTAT CCCAACGTTA AAGAAATCTA TGCCCCTACC GGAGCCGCTC CCAAACGGGG CGAACTCTTT AAAAATCCGG CCCTTGCCAA CACACTCGAA AAAATTGCAA AAGGAGGCCG CGATGCATTT TATAAAGGGG ATATTGCTCA AACCATTGAC GCCTTTATGA AGAAAATGGG CGGCTACCTC AGCGCCAAAG ATCTGGCCGA TCATACCTCT GAATGGGTTG AGCCCGTCTC GACCAATTAC CGGGGTTACG ACGTGTGGGA ATTGCCCCCC AACAGCCAGG GCATTGCAGC TTTGCAGATG CTGAATCTGC TGGAAGGCTA CGATTTTTCG CAAACGCCCT GGGGTAGCCC GGAGCATATT CACCGGTTCG TGGAAGCAAA AAAGCTGGCG TTCGAAGACC GGGCCAAATA CTACGCCGAC CCGGCCTTTG CCAAAATTCC CGTCAGAGAA CTCGTCAGTA AATCGTACGC GGCCGAACGT CGTCAGTTGA TCGACCTCAA CCGGGCCGCC AGTCGGGTGG ATGCGGGTAA CCCGACGCTT AAGCAGGGCG ATACGATTTA CCTGACCGTA GCCGACGACG AAGGCAATAT GGTCTCGCTC ATTCAAAGTA ACTACCGTGG CTTTGGCTCC GGTATGGCAC CCGACGGGCT GGGGTTCATG CTTCAGGATC GGGGAGAACT TTACAGCCTG ATTGACGGAC AGAACAATAC TTATGCACCC CATAAACGTC CTTTTCAGAC CATCATCCCC GCTTTTGTGA CCAAAGATGG GCAGCCTTTC ATGAGTTTCG GCGTTATGGG AGGCAGCTTT CAACCCCTGG GCCATGTTCA GATCATCATG AACATGATCG ACTTCGGGAT GAACCCGCAG GAAGCGGGCG ACGCGCCCCG CATCGACCAC CAGGGATCAT CTGAACCAAC AGGCGAACGA ATGACCGACT CGGGTCAGAT CACCCTGGAA TCGGGTTATC CCTACGAAAC GATTCGCGAT CTTATGCGTA AAGGCCATAA GGTAGGCTAT GGACTGGGTG GTTATGGTGG CTATCAGGCC ATTATGTACG ACGCCAAGAA CAAAGTGTAC CACGGCGCTA CAGAATCCAG AAAAGACGGA CAAGCCGCCG GATTTTAA
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Protein sequence | MKKTVLSLLF LASLVNNVLA QDRLSGKSFA TRAVVMARHG MACTSHPLST QAAIDVLRSG GNAIDAAIAA NAMEGLVEPH VNGIGGDLFA IVWDAKTKKL YGLNASGRSP YTLTLAEFQK RGLTHIPSDG PLPVSVPGCV DGWFELHKRF GKAPMTSILA HAIRYAREGY PVHDEAAFYW PSMIARFGKY PNVKEIYAPT GAAPKRGELF KNPALANTLE KIAKGGRDAF YKGDIAQTID AFMKKMGGYL SAKDLADHTS EWVEPVSTNY RGYDVWELPP NSQGIAALQM LNLLEGYDFS QTPWGSPEHI HRFVEAKKLA FEDRAKYYAD PAFAKIPVRE LVSKSYAAER RQLIDLNRAA SRVDAGNPTL KQGDTIYLTV ADDEGNMVSL IQSNYRGFGS GMAPDGLGFM LQDRGELYSL IDGQNNTYAP HKRPFQTIIP AFVTKDGQPF MSFGVMGGSF QPLGHVQIIM NMIDFGMNPQ EAGDAPRIDH QGSSEPTGER MTDSGQITLE SGYPYETIRD LMRKGHKVGY GLGGYGGYQA IMYDAKNKVY HGATESRKDG QAAGF
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