Gene Slin_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2683 
Symbol 
ID8726433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3247801 
End bp3249498 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content55% 
IMG OID 
Productgamma-glutamyltransferase 
Protein accessionYP_003387498 
Protein GI284037568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.186681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.206035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CTGTACTCTC GCTCCTCTTT CTGGCTTCGC TCGTCAACAA CGTTCTGGCT 
CAGGATAGGC TCAGCGGCAA GTCATTCGCT ACACGCGCCG TAGTAATGGC TCGTCATGGC
ATGGCCTGTA CCTCACACCC GCTTTCAACT CAAGCTGCTA TTGACGTGCT GCGCTCCGGC
GGCAATGCGA TCGATGCCGC GATTGCCGCC AACGCCATGG AAGGGCTGGT GGAGCCGCAC
GTCAACGGCA TTGGCGGAGA CCTGTTCGCT ATTGTGTGGG ATGCCAAAAC CAAAAAACTG
TATGGACTCA ATGCCTCGGG GCGGTCGCCT TATACGCTTA CCCTGGCGGA GTTTCAAAAA
AGGGGGCTCA CACATATTCC GTCCGATGGC CCCCTGCCCG TGTCGGTGCC CGGTTGCGTA
GACGGCTGGT TTGAACTGCA CAAGCGGTTC GGCAAAGCAC CTATGACCAG CATTTTAGCG
CACGCCATCC GTTACGCGCG CGAAGGCTAC CCCGTTCACG ACGAAGCCGC CTTTTACTGG
CCGTCGATGA TTGCGCGCTT CGGTAAGTAT CCCAACGTTA AAGAAATCTA TGCCCCTACC
GGAGCCGCTC CCAAACGGGG CGAACTCTTT AAAAATCCGG CCCTTGCCAA CACACTCGAA
AAAATTGCAA AAGGAGGCCG CGATGCATTT TATAAAGGGG ATATTGCTCA AACCATTGAC
GCCTTTATGA AGAAAATGGG CGGCTACCTC AGCGCCAAAG ATCTGGCCGA TCATACCTCT
GAATGGGTTG AGCCCGTCTC GACCAATTAC CGGGGTTACG ACGTGTGGGA ATTGCCCCCC
AACAGCCAGG GCATTGCAGC TTTGCAGATG CTGAATCTGC TGGAAGGCTA CGATTTTTCG
CAAACGCCCT GGGGTAGCCC GGAGCATATT CACCGGTTCG TGGAAGCAAA AAAGCTGGCG
TTCGAAGACC GGGCCAAATA CTACGCCGAC CCGGCCTTTG CCAAAATTCC CGTCAGAGAA
CTCGTCAGTA AATCGTACGC GGCCGAACGT CGTCAGTTGA TCGACCTCAA CCGGGCCGCC
AGTCGGGTGG ATGCGGGTAA CCCGACGCTT AAGCAGGGCG ATACGATTTA CCTGACCGTA
GCCGACGACG AAGGCAATAT GGTCTCGCTC ATTCAAAGTA ACTACCGTGG CTTTGGCTCC
GGTATGGCAC CCGACGGGCT GGGGTTCATG CTTCAGGATC GGGGAGAACT TTACAGCCTG
ATTGACGGAC AGAACAATAC TTATGCACCC CATAAACGTC CTTTTCAGAC CATCATCCCC
GCTTTTGTGA CCAAAGATGG GCAGCCTTTC ATGAGTTTCG GCGTTATGGG AGGCAGCTTT
CAACCCCTGG GCCATGTTCA GATCATCATG AACATGATCG ACTTCGGGAT GAACCCGCAG
GAAGCGGGCG ACGCGCCCCG CATCGACCAC CAGGGATCAT CTGAACCAAC AGGCGAACGA
ATGACCGACT CGGGTCAGAT CACCCTGGAA TCGGGTTATC CCTACGAAAC GATTCGCGAT
CTTATGCGTA AAGGCCATAA GGTAGGCTAT GGACTGGGTG GTTATGGTGG CTATCAGGCC
ATTATGTACG ACGCCAAGAA CAAAGTGTAC CACGGCGCTA CAGAATCCAG AAAAGACGGA
CAAGCCGCCG GATTTTAA
 
Protein sequence
MKKTVLSLLF LASLVNNVLA QDRLSGKSFA TRAVVMARHG MACTSHPLST QAAIDVLRSG 
GNAIDAAIAA NAMEGLVEPH VNGIGGDLFA IVWDAKTKKL YGLNASGRSP YTLTLAEFQK
RGLTHIPSDG PLPVSVPGCV DGWFELHKRF GKAPMTSILA HAIRYAREGY PVHDEAAFYW
PSMIARFGKY PNVKEIYAPT GAAPKRGELF KNPALANTLE KIAKGGRDAF YKGDIAQTID
AFMKKMGGYL SAKDLADHTS EWVEPVSTNY RGYDVWELPP NSQGIAALQM LNLLEGYDFS
QTPWGSPEHI HRFVEAKKLA FEDRAKYYAD PAFAKIPVRE LVSKSYAAER RQLIDLNRAA
SRVDAGNPTL KQGDTIYLTV ADDEGNMVSL IQSNYRGFGS GMAPDGLGFM LQDRGELYSL
IDGQNNTYAP HKRPFQTIIP AFVTKDGQPF MSFGVMGGSF QPLGHVQIIM NMIDFGMNPQ
EAGDAPRIDH QGSSEPTGER MTDSGQITLE SGYPYETIRD LMRKGHKVGY GLGGYGGYQA
IMYDAKNKVY HGATESRKDG QAAGF