| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2677 |
|---|
| Symbol | |
|---|
| ID | 8726427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3239142 |
|---|
| End bp | 3240152 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003387492 |
|---|
| Protein GI | 284037562 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.069461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGC GCTTTTTCTG CCTGAGAGTA ACGGCTACAA TGCTTTATTT TTCAATATTT
TTACCCATGA TTTATCGAAT TCGGGCTGTT GTCCTGCTTG GTCTTTGCTG GCTGCTGCTG
AGTGAGTCTG TACGGGCGCA GCCTTTACCA ATAACACCGG CCATGCCTGA GCCAACGGGT
ATAAACCAGG GGCGTTTTAT CGGCGTATTG GTCGGAACGG CTGCTTTTTA CACCATCACG
CTGCTTATGC TGCGAAAACA ATGGTACAAA AAGAAAGTCC CGTTTCATTC GTTCAACGAT
AACGCCGAGT GGCTTCAGAT GGATAAAATT GGGCATGGCG CTACCGCTTA TTGTATGAGC
AGGGGCGGCT ACGAGCTGAT GCGCTGGAGT GGCGTCAACG AGCGAGCCAG TATTCTGACC
GGCGGTTTGC TGGCTTTGTT GTTCCAGACA ACCCTCGAAG TATACGATGG CCATTCGGAG
GGCTGGGGCT TCTCGAAAGG GGATATGTTG GCCAATGTTG CGGGAACGGC GTTGTTTGTA
GGGCAGCAGT ACGGTGCCGG ACAGCAGGTT GTAAGCCTGA AATACGGCTT TCGGAAAACG
ATCTTCCCGC CCTTCAGGCC TAACGTACTG GGAAAAACGA CGGGTGTTCA AATGCTGAAA
GATTATAACG GGCAACAATA CTGGCTGTCT GTTAACCTGG CATCGGTGTT GCCGGTAGGG
CCTTCTTTCC CGCGCTGGCT GAATCTGGAC GTTGGGTACA GCGGAAGCGG TATGATTGGT
GGCCACGAAA ACCCGCCCAT CGTTGACAAA GACGGCAGGC AAGTTAAATT TGAGCGGTAT
CGTCAGTTTT TTATCTCGCC CGATGCCGAC TTTTCGCGGG TTGCCACGTT TTCTCCCTCC
CTTCAACGGT TCATTGGTAC GGCACAGTTC TTCAAAATAC CGGCTCCCTC TTTGGAGTTC
AACCGCGTAA ACGGACTTCG GTTCCACCCG CTTATTCTAC CAAAAGAATG A
|
|---|
| Protein sequence | MQTRFFCLRV TATMLYFSIF LPMIYRIRAV VLLGLCWLLL SESVRAQPLP ITPAMPEPTG
INQGRFIGVL VGTAAFYTIT LLMLRKQWYK KKVPFHSFND NAEWLQMDKI GHGATAYCMS
RGGYELMRWS GVNERASILT GGLLALLFQT TLEVYDGHSE GWGFSKGDML ANVAGTALFV
GQQYGAGQQV VSLKYGFRKT IFPPFRPNVL GKTTGVQMLK DYNGQQYWLS VNLASVLPVG
PSFPRWLNLD VGYSGSGMIG GHENPPIVDK DGRQVKFERY RQFFISPDAD FSRVATFSPS
LQRFIGTAQF FKIPAPSLEF NRVNGLRFHP LILPKE
|
|---|
| |