Gene Slin_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2624 
Symbol 
ID8726369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3171923 
End bp3173041 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content56% 
IMG OID 
ProductKelch repeat-containing protein 
Protein accessionYP_003387440 
Protein GI284037510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0288564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTATC TGTCGTTACA TTCCGCAAGT GCACAGGACC GGTTGCGCTA TACCCGGCTC 
CCGGATCTAC CTGCCCTGAA TGGCTCCTTA AATCCGGGCG TGGCGGGGGC TTTTGCAGGC
TGTAGTCACG GCGCTTTGCT CATTGCCGGA GGAGCCAATT TTCCCAATGG CTTTCCCTGG
CAAGGTGGTG CCAAAGTCTG GCATTCGACA GTCTATGTGC TTCGTCATGA GGGAAATACG
TACCATTGGA AAGCCACGCA TCAACTGGCT CATCCACGGG CTTATGGCGC TTCGGTGGTC
TGGCGGGATC AGCTTATTTG TGTAGGAGGC AATGACGACA AACACCGGTT CGCCGACGTG
TTTAGCCTGC GCTGGCATCC GTCAGACGCT ATGCTCGTCG AGCAGTCGCT TCCGGCACTA
CCCATACCGA TGGCCAACCT TGCCGCTGCC GTTTCAGGGA ATAAGCTGTA TGTGTTCGGT
GGGGAGTCGG ACTGGGGAAC GGAAGCTGGT TTGTACGTAC TTGACCTCGA AACCCCGGCT
GGGGGCTGGC AAAAACTGGC CGACTTTCCC GGTCCGGCCA GAGCGTATAC GGCCATGACA
GTTCAGGCAA ATGAAAACGG GCCAACGCTG TATGTGGTAG GAGGAAGGCA GACGGTTAAC
GGGCGAACAA CTGTTTATGC CGATGTCTAC GCGTATCAGA TCAACCGACA GCGGTGGCAG
CGACTGCCCG ATATGCCTCA GCCGCTGGCA GCCCATCAGG TTATTGGCAT CGGTACCCGT
TCGCTTTTTG TTTTTGGCGG TGACGATGGC AAGCGGCTTC AGCAGATCGA AGCCCTGTCG
AATCAGGTAA ATCAGCTACC CGAAGGCCTT GACAGGGAAA AACGCCGGAC CGAACGTAAT
CGTCTCCAGA TCGACCACCC TGGCTTTGTC AAAACGGTCT GGCAGTTTCG GACGGATACT
AAAGTCTGGT CGGCGGTGGA CAGCTTACCC TTCCCGACGC CCGTGACAAC CCCGGTTGTA
CGGTGGGAGC AAAGCCTTAT TGTACCGAGT GGCGAAGTCA CCCCCGGTAT CCGAACGCCT
GCTATCTGGA AAATTGACAT GGACCAATCG AAGTACTGA
 
Protein sequence
MTYLSLHSAS AQDRLRYTRL PDLPALNGSL NPGVAGAFAG CSHGALLIAG GANFPNGFPW 
QGGAKVWHST VYVLRHEGNT YHWKATHQLA HPRAYGASVV WRDQLICVGG NDDKHRFADV
FSLRWHPSDA MLVEQSLPAL PIPMANLAAA VSGNKLYVFG GESDWGTEAG LYVLDLETPA
GGWQKLADFP GPARAYTAMT VQANENGPTL YVVGGRQTVN GRTTVYADVY AYQINRQRWQ
RLPDMPQPLA AHQVIGIGTR SLFVFGGDDG KRLQQIEALS NQVNQLPEGL DREKRRTERN
RLQIDHPGFV KTVWQFRTDT KVWSAVDSLP FPTPVTTPVV RWEQSLIVPS GEVTPGIRTP
AIWKIDMDQS KY