Gene Slin_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2577 
Symbol 
ID8726322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3116389 
End bp3117459 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387394 
Protein GI284037464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.409061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTG CATTCACGAT TTGTTCCATA AATTATTTAG CTCAGGCCCG TACCTTGGGC 
GACTCACTAC GACAAACCAA CCCCGATTAC CAGTACATAA TCGGGTTAGT TGATAAATTG
AGTGTTGCTA ACTTACCCGC AGAGCTGGTT CCGGAATACC CCATGCTGGA GGTAGACAAA
ATCGGCATCC CTGATTTTGC AGCCATGTGC GATCGGTATG ATATTACGGA GTTAAATACC
GCCGTAAAGC CGTTTTATAT CGACTACCTG TATCAAACGT ACCCCGACGC CAGCGAGGTC
ATCTACTTTG ATCCCGATAT CATCGTTTTT CAGCCACTTC AGGAATTAAA TGAAGCTTTG
GCTACACATA GTCTGGTATT GACGCCCCAC ACCTGTTCGC CAACCCCCGA CTGGGAACGT
CCCAACGAAC AGCATCACCT GAACACGGGC ATATTCAACC TGGGTTTTAT TGGGCTTCGT
AACGATGCTA CCGCCCGTCG GTTCGTAAAC TGGTGGAAAG ATCGCCTGGT GTATGAGTGC
CGAATTGACC TCTGCGAAGG CCTTTTTGTC GATCAGCACT GGGTCAATTT CGCTCCCGTT
TACTTCAACA ACGTTCTGGT TGACCATCAT TTAGGCTATA ACATGGCCTA CTGGAACCTG
CACGAACGGT TTATCAGCCA AACCGAAGCC GGGAACTGGA TGGTTAGCAA CGAACGTACC
TCGCAGCAAC CCTACCAAGC CGAACCGTTG CAGTTTTTTC ATTTCAGCGG TTATAATCCC
GACAAACCCG AGGAGATTTC GAAGTACCAA ACCCGGTATA GCTTCCCTAA CCAATCGAAC
CAGACCGCTG GAAAATCGGT CCGCTTTGCT GATAAGCCCG AACAGCAGCG ACCCGACGTA
AGACCTTTGT TCGATTTGTA CCGCAGCCGA CTGCTGGCAA ACCAGAACGA GCTGTATCGC
CAATATCCCT GCGTGTATAT CAAGCCACCT AAAATTTTTC GTTATCAACG GGTACGCAGG
CTGTTGAAAA CTCCTTTCAA CCGACTTATT ACGCTCTTAG AATCTCGTTA A
 
Protein sequence
MTLAFTICSI NYLAQARTLG DSLRQTNPDY QYIIGLVDKL SVANLPAELV PEYPMLEVDK 
IGIPDFAAMC DRYDITELNT AVKPFYIDYL YQTYPDASEV IYFDPDIIVF QPLQELNEAL
ATHSLVLTPH TCSPTPDWER PNEQHHLNTG IFNLGFIGLR NDATARRFVN WWKDRLVYEC
RIDLCEGLFV DQHWVNFAPV YFNNVLVDHH LGYNMAYWNL HERFISQTEA GNWMVSNERT
SQQPYQAEPL QFFHFSGYNP DKPEEISKYQ TRYSFPNQSN QTAGKSVRFA DKPEQQRPDV
RPLFDLYRSR LLANQNELYR QYPCVYIKPP KIFRYQRVRR LLKTPFNRLI TLLESR