Gene Slin_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2534 
Symbol 
ID8726278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3055530 
End bp3056255 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content52% 
IMG OID 
Product3-demethylubiquinone-9 3-O-methyltransferase 
Protein accessionYP_003387351 
Protein GI284037421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.115173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAC AAACACGCTC TACCCGCAAA GAACTACTCG ATGACGACAC CATTCCCTTT 
GCGGATATTA GCCGAAACAT GCAGGAGTTA GATCGGGTAA ACCATTGGTT AGGCGGTCAT
AGCACCACCC TGAAGGGATT TAAAACCCTG CTGGGCGACC GGAAACAGGT ACATGTCTGT
GAAATTGGGT CGGGAGGTGG CGACAACCTT CTGGTTTTGT TAACCTGGTG TAAGCAGCAT
TCCATCGACG TTCACCTTAC TGGCATCGAT TTCAACCCGC ACTGCATCGC CTTTGCCCGT
ACCCGTACCC TGCTCGGCCA GAATCGGCTC GGCCCGAATG GGCTCGACCC AGCCACGACC
TGGATAACCA GCGACTACCG GGATGTCAAT TTTGACACGC CACCCGACAT TATTTTCTCC
AGTCTATTCT GTCATCATTT TACCGACGAC GAATTGGTGG ACCAGCTAGG ATGGATGCAT
CGGACGGCCC GAATTGGTTT TTTCATCAAT GACCTCCACC GGCATCCGTT CGCTTATTAC
GCCATCAAAT GGCTCACCCG GCTCTTTTCG CGGTCTTACC TTGTTAAGCA TGACGCCCCA
TTAAGTGTTG CGCGGGGATT CAGGAAGAAG GAATGGCAGC AACTGTTTAC GAAAGCGAAC
CTGGACGGTT ATACAATCCG GCATCGGTGG GCGTTTCGTC ATCTGATTAC GTGTAAACCG
GAATGA
 
Protein sequence
MNLQTRSTRK ELLDDDTIPF ADISRNMQEL DRVNHWLGGH STTLKGFKTL LGDRKQVHVC 
EIGSGGGDNL LVLLTWCKQH SIDVHLTGID FNPHCIAFAR TRTLLGQNRL GPNGLDPATT
WITSDYRDVN FDTPPDIIFS SLFCHHFTDD ELVDQLGWMH RTARIGFFIN DLHRHPFAYY
AIKWLTRLFS RSYLVKHDAP LSVARGFRKK EWQQLFTKAN LDGYTIRHRW AFRHLITCKP
E