| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2348 |
|---|
| Symbol | |
|---|
| ID | 8726092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2827384 |
|---|
| End bp | 2828538 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003387168 |
|---|
| Protein GI | 284037238 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.555804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGC ATCTGCTCAA ATTAATCTGG AATAAAAAGA AAGCCCACGC GCTGCTGATC
GTCGAGATCT GGGCGTCGTT CATGGTGCTT TTCGGGCTGG CGACGCTTGT TGTTGTCAAC
GTCCGGAATT ATCGGGAACC CATGGGTTTC ACCTATGAAA ATGTATGGGC CATTGGCCTG
AAAAGCAATC AGGATACCGT TGCCATTGCC GAGAAACTTC AGCGGGTTAC GCAACGACTG
AAGGCATATC CGGAAGTCGC GTCTGTGTCA CGCATGAGTA GCAATTTTCC GTTTTCGGCC
AATACCATGA ACAATGGCAT CGAATACAAC AAGCGGAAAG TGCTGGCCGA TTTTTACGCG
ACCGACGAGA ATTTTGCCAA AACACTCGAC ATTGATGTAA TCGAAGGGAA GTGGTATCAG
TATGCCGACA GTGTCGGTAA ATACACCCCG GTTGTCATTA ATCAGAAAAC ACGGGAAGAA
CTGTTCGAGA ATGAAAATCC GCTGGGAAAA ATCATTGGTG ACCGGTTCAA AGTGGTCGGC
GTGGTCAATA CGTTCAAAGC CAAAGGGGAA TTTATGTCGG ATCAACCCGC TGTTTTTGAG
CTGTTCAAGC CCGATGCCAC CTGGAACGAC ACTATGCTCA TTAAAGTGAA ACCCGGGACC
GATGCCGTTT TTGAAGCCAA ACTGGTGAAG GAAATTGCGG CCATGATGAC CGGTTGGAAC
GTAGAGGTCG ATTACCTGAC TGATTCGCGG AAAAACCAAC ACAACCTCGT TCTCGTCCCG
ATCATTATTG CGTTGATTGT GTGTAGTTTT TTATTGATCA ACGTGGCGCT TGGCTTGTTC
GGCGTGCTGA ACCTGAGCAT CGCCAAACGC CGGGGCGAAA TCGGACTGCG TCGGGCATTG
GGCGCAACGG GGAGTGGAAT CTCTACCCAG TTCATCGGCG AAATATGGGT TTTGGCTACC
TTCGCGCTGT TAATTGGGCT GTTGTTTGCC GCGCAGTTTC CCCTGCTCAA TGTGTTTGAC
GTAAAGTCGG GTACCTATGT GACGGCCATA CTGATCGCTA TGCTGATCAT CTACGGAATT
GTCACCCTGT GTGCATTATT CCCAAGTCGG CAGGCAGCGG GCATTCAACC GGCAACGGCT
TTACACGAAG AATAA
|
|---|
| Protein sequence | MIPHLLKLIW NKKKAHALLI VEIWASFMVL FGLATLVVVN VRNYREPMGF TYENVWAIGL
KSNQDTVAIA EKLQRVTQRL KAYPEVASVS RMSSNFPFSA NTMNNGIEYN KRKVLADFYA
TDENFAKTLD IDVIEGKWYQ YADSVGKYTP VVINQKTREE LFENENPLGK IIGDRFKVVG
VVNTFKAKGE FMSDQPAVFE LFKPDATWND TMLIKVKPGT DAVFEAKLVK EIAAMMTGWN
VEVDYLTDSR KNQHNLVLVP IIIALIVCSF LLINVALGLF GVLNLSIAKR RGEIGLRRAL
GATGSGISTQ FIGEIWVLAT FALLIGLLFA AQFPLLNVFD VKSGTYVTAI LIAMLIIYGI
VTLCALFPSR QAAGIQPATA LHEE
|
|---|
| |