Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2243 |
Symbol | |
ID | 8725983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2713783 |
End bp | 2714535 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | intradiol ring-cleavage dioxygenase |
Protein accession | YP_003387063 |
Protein GI | 284037133 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGTA AAGAATTTTT GAAGCGTGGC TTTGTTAGCT TACTGGGCAT CACGGCGGTT GCTCCGCTGA TTGGAGCCTG TTCATCCGCG ACGGTTGATC CGGTCAGTAC CACCACCACC GGCAGTACGA CCTCGACGGG ATCTACAAAT GGCAGTTCGT CCAGTAACTG CACCGTTACG CCTTCAGAAA CGGAAGGGCC TTTTCCTACC AAAGTACCGG CCAACTTCGT TATTAAAGAC ATTCGCTCCG ACCGAACCGG TGTGGCCTTT ACCATGAATA TCACGATCAA AAATGCCAGT AACAGTTGCG CGGCTCTGGC CGGGGCACTC GTTGATGTGT GGCATTGCGA TAAAGACGGC TATTATTCTG AATACGGCGG CACAGGGATG CAAAGCGCCG ATTTTACGAA AGTAGACTTT CTGAGAGGTC GGCAGGTGAC CGATGCCAAT GGACTGGTTT CCTTTACGTC GATCTTTCCG GGCTGGTATT CGGGTCGGGC GCCCCACATT CACGTTCATA TTTATAATTC GGCGGGCAAG TCGCTGCTAG TCACGCAAAT CGCCTTTCCG TACGATATCA GCAACACGGT CTACACAACG GCTCAATCGT ATGGGTATAC CAAAGGAAAG CAGGACACGC TCAACGAACG GGATAACGTG TTCTCGGATG GCTATACAAC CGAGTTAGCC ACTGTTTCGG GAAGCATATC CGGTGGCTAT ACACTCACAC ACACCATCGT TGTGAACGCC TGA
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Protein sequence | MERKEFLKRG FVSLLGITAV APLIGACSSA TVDPVSTTTT GSTTSTGSTN GSSSSNCTVT PSETEGPFPT KVPANFVIKD IRSDRTGVAF TMNITIKNAS NSCAALAGAL VDVWHCDKDG YYSEYGGTGM QSADFTKVDF LRGRQVTDAN GLVSFTSIFP GWYSGRAPHI HVHIYNSAGK SLLVTQIAFP YDISNTVYTT AQSYGYTKGK QDTLNERDNV FSDGYTTELA TVSGSISGGY TLTHTIVVNA
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