Gene Slin_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2243 
Symbol 
ID8725983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2713783 
End bp2714535 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content52% 
IMG OID 
Productintradiol ring-cleavage dioxygenase 
Protein accessionYP_003387063 
Protein GI284037133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTA AAGAATTTTT GAAGCGTGGC TTTGTTAGCT TACTGGGCAT CACGGCGGTT 
GCTCCGCTGA TTGGAGCCTG TTCATCCGCG ACGGTTGATC CGGTCAGTAC CACCACCACC
GGCAGTACGA CCTCGACGGG ATCTACAAAT GGCAGTTCGT CCAGTAACTG CACCGTTACG
CCTTCAGAAA CGGAAGGGCC TTTTCCTACC AAAGTACCGG CCAACTTCGT TATTAAAGAC
ATTCGCTCCG ACCGAACCGG TGTGGCCTTT ACCATGAATA TCACGATCAA AAATGCCAGT
AACAGTTGCG CGGCTCTGGC CGGGGCACTC GTTGATGTGT GGCATTGCGA TAAAGACGGC
TATTATTCTG AATACGGCGG CACAGGGATG CAAAGCGCCG ATTTTACGAA AGTAGACTTT
CTGAGAGGTC GGCAGGTGAC CGATGCCAAT GGACTGGTTT CCTTTACGTC GATCTTTCCG
GGCTGGTATT CGGGTCGGGC GCCCCACATT CACGTTCATA TTTATAATTC GGCGGGCAAG
TCGCTGCTAG TCACGCAAAT CGCCTTTCCG TACGATATCA GCAACACGGT CTACACAACG
GCTCAATCGT ATGGGTATAC CAAAGGAAAG CAGGACACGC TCAACGAACG GGATAACGTG
TTCTCGGATG GCTATACAAC CGAGTTAGCC ACTGTTTCGG GAAGCATATC CGGTGGCTAT
ACACTCACAC ACACCATCGT TGTGAACGCC TGA
 
Protein sequence
MERKEFLKRG FVSLLGITAV APLIGACSSA TVDPVSTTTT GSTTSTGSTN GSSSSNCTVT 
PSETEGPFPT KVPANFVIKD IRSDRTGVAF TMNITIKNAS NSCAALAGAL VDVWHCDKDG
YYSEYGGTGM QSADFTKVDF LRGRQVTDAN GLVSFTSIFP GWYSGRAPHI HVHIYNSAGK
SLLVTQIAFP YDISNTVYTT AQSYGYTKGK QDTLNERDNV FSDGYTTELA TVSGSISGGY
TLTHTIVVNA