Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2202 |
Symbol | |
ID | 8725940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2669555 |
End bp | 2670460 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003387023 |
Protein GI | 284037093 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00817339 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTATTGTT TAGAAACAAA GGGCCTATAC TATCAGTATG CTCAGCAGCA AAGAATCCTA TCCGGAATTG ACCTAAAGGT ACCAGAGCAC AGTATTTACG GTTTCCTGGG GCCCAACGGT GCAGGAAAAA CAACCACCAT GCGATTAGTA CTTGGCCTGC TTACAAGCCA GGCTGGCGAG ATCAATATTT TCGGCAGGCC ATTAGCGGCA AACCGCCTAG CGATTTTGCG CAAGATTGGC TCCCTGATCG AAATGCCCTC TTTCTATGCC CATCTCACGG TTACCGAAAA CCTGCGCATA TTGCAATCAA TTTACCGCAC GCCAGTATCA CGGATCCAAT ACGTACTCGA TATCACAGGA CTGAACCATA CTGGAGCCAA ACCGGTCGGA AAGTTTTCGC TCGGCATGAA GCAGCGCTTC GGTATTGCGG CCTCGCTCTT GCATTCGCCG GAACTATTGA TACTGGATGA GCCGACTAAC GGACTGGATC CTAACGGCAT GATCGAGGTC TGGGAATTGC TCCGCTCGTT GAACAGGCAG GAAGGCTTGT CTATTTTTAT ATCGTCTCAC TTGCTTGCCG AAATCGAACG GCGGGTTACC CATCTTGGGA TCATCCATAA AGGTGAACTC CTTTTTCAGG GGCGGCTCGA TGAATTGCAA TCGCAAGCCA TGCAGTATAC CATTTTATCG ACTAGTGATC CAGAAAGAGC ATTAAAACTC GTTCAGCCTT TCGACGATAC GGCCTTTATC GACGAACGGC AACTACATAC TAAGCTATTG TCCGCTGACA GCATCGCGGC AATGAGTAGG CTACTAGTGC AACACGAGGT GGATCTCTAT CAGATCACTA CCCAACAGGA AGATCTTGAA CACCTGTTTA TGCATTTAAT TGGTCCTAAC TCATGA
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Protein sequence | MYCLETKGLY YQYAQQQRIL SGIDLKVPEH SIYGFLGPNG AGKTTTMRLV LGLLTSQAGE INIFGRPLAA NRLAILRKIG SLIEMPSFYA HLTVTENLRI LQSIYRTPVS RIQYVLDITG LNHTGAKPVG KFSLGMKQRF GIAASLLHSP ELLILDEPTN GLDPNGMIEV WELLRSLNRQ EGLSIFISSH LLAEIERRVT HLGIIHKGEL LFQGRLDELQ SQAMQYTILS TSDPERALKL VQPFDDTAFI DERQLHTKLL SADSIAAMSR LLVQHEVDLY QITTQQEDLE HLFMHLIGPN S
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