Gene Slin_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2201 
Symbol 
ID8725939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2668773 
End bp2669558 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387022 
Protein GI284037092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00824673 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTGA TGTTTATCTA TACGTTCCAG AGTGAGTGGC TCAAAAGAAA GCGCAGCCTG 
GCTTCCCGCA TGATCATTAC CGGTGCTTTC TTTACTCCCG TCGTGATTAT TGTCGCCCGC
TTGATGCGCA AAGATTACCT CACGGTTGTT TATGCCGATC CTGCCTTCTG GAAACACCTT
TGGTCAAGCG CATGGGAGTC AATGGCGGTA TTTTTGCTGC CACTCGGCGC TGTTTTATTG
ACAAGTCTGC TAACCCAACT AGAATTTAAA AATAATACCT GGAAACAGGT CCATACCCTG
CCGCTCCGTC TAAGCACCAT TTATTTTACC AAGCTTTCGG TCATACTGGT GATGCTGTTG
CAGTTTATCT TACTGTTTAC TGTAGGCGTC CTAATTTCCG GATACCTTCC AGCTTTATTG
ACCGGAACGA AAATCCAGGC GTTGTCTTTC AGTCTGATCG GTCAATTCCT GAACGAGGAC
CTATCGTACT TTATTTGCCT GCTGCCAATC GTTGTCAGCC AGTATACGAT CAGTTTGTTC
TATAAAAATT TCTTGGTTCC AGTCGGGATC GGGTTTATAG GTTGGGTCAG CGCTTTATCT
ATGTTATCTT GGCGGTATGC GCTTATTTTT CCTTATACGT ATGTGATCCA GCGGTATCTG
CACAGCACGG GCAAAGGTGG GCTGACAGTT TCAGTGACTG GTTTGACCTA CATTTCGCTC
GCCTGGTTTA TACTGATCAC GGTAACGGGG TATCTGCTTT ACCAGCTCAA AAAGGAGAAA
GGTTAA
 
Protein sequence
MKLMFIYTFQ SEWLKRKRSL ASRMIITGAF FTPVVIIVAR LMRKDYLTVV YADPAFWKHL 
WSSAWESMAV FLLPLGAVLL TSLLTQLEFK NNTWKQVHTL PLRLSTIYFT KLSVILVMLL
QFILLFTVGV LISGYLPALL TGTKIQALSF SLIGQFLNED LSYFICLLPI VVSQYTISLF
YKNFLVPVGI GFIGWVSALS MLSWRYALIF PYTYVIQRYL HSTGKGGLTV SVTGLTYISL
AWFILITVTG YLLYQLKKEK G