Gene Slin_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1997 
Symbol 
ID8725735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2411000 
End bp2411662 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content41% 
IMG OID 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_003386841 
Protein GI284036911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0842968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00554858 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACTCGTA GAAAATCTCA TCGCTTTCTT CAAAATGCAG AGAGTACAAA TGTAATTGAA 
TCTGGTAAAC CACTTTACAA AACAATACTT GGTCGTTGGA GGACCGATTT CTTCGGGAAC
GATAATCCAA TTGTTCTTGA ACTAGCCTGT GGAAAAGGTG AATATACGGT AGGTTTAGCT
CAGGCTTTTC CAGATGTAAA TTTTATTGGC GTTGATATTA AAGGAGACAG GATCGCCCGG
GGTTCTAAAA TCGCCCAGAA CCTGGGTTTA TCGAATGTAG CGTTCCTACG AACGGACATT
AACTTTCTGG GTGAATTCTT CGCTAAAGGG GAAATCAACG AGATCTGGAT CACTTTTCCC
GACCCACAGC CAAGACCAAA ACAGGAGAAA CATCGGCTGA CGCATTCTCG TTTTTTAGCT
ATGTACCAAT CCTTGCTAGT TCCGGGAGGG ACGTTGCACT TGAAGACTGA TAACCCTGAA
CTGTTTGCTT ACAGTTTGGA GCAGGTTCAA GCAGCACAAG GAAGGGATTT ACAATATACA
ACTGACTTGT ATAACTCTCC GCTGAATGAA ATCCACCTGG GCATAAAAAC CAAGTACGAA
CAAATCTTCT TTGACAAGGG ATTTACAATT AACTATTTAC AATGTAAAAT GGGTGTGATT
TAA
 
Protein sequence
MTRRKSHRFL QNAESTNVIE SGKPLYKTIL GRWRTDFFGN DNPIVLELAC GKGEYTVGLA 
QAFPDVNFIG VDIKGDRIAR GSKIAQNLGL SNVAFLRTDI NFLGEFFAKG EINEIWITFP
DPQPRPKQEK HRLTHSRFLA MYQSLLVPGG TLHLKTDNPE LFAYSLEQVQ AAQGRDLQYT
TDLYNSPLNE IHLGIKTKYE QIFFDKGFTI NYLQCKMGVI