| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1994 |
|---|
| Symbol | |
|---|
| ID | 8725732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2407295 |
|---|
| End bp | 2408458 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003386838 |
|---|
| Protein GI | 284036908 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.376445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00440814 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAG TTATCGAGTT TTTTCAGCAA CTCGCAAATG TTAACGATTG GCCTCCCCGC
TGGTATTGTG GTCGATGGAC AGACTTTCAC GGCTGGCTTT ATATAGTATC TGACTTAACC
ATCTGGCTGG CCTACATGGC TATCCCACTC ATTTTAATCC GATTTATACT AGTCAAAAAG
GGCGTACCCC TATCCGGTGT TTTTGTACTG TTTGGTGCCT TCATTCTCCT CTGCGGCCTT
ACCCACTTGC TCGATGCAAT CATGTTCTGG TGGCCCGCCT ATCGAATCAA TGCCCTGATC
CGTTTTTGTA CCGCCATGGT ATCCATTGCA ACCGTTCTGG CTCTGATCCG GTACTTCGAT
GAAGCCGTTG GGCTGCGTAC ATCAAAAGAG TATGACCGCG AGTTGTCATT TCGTCAGCAG
GCTATGCAGG AGCTTACCCG CTCTAATGAA GAACTTCAGC AGTTTGCCTA CATTGCATCG
CATGATTTAC AGTCACCGCT CAAAACAATC GTTAACTACC TTACACTACT GGAAAGTAAA
CACGGAGAGA AACTGGATAC GGACGCTGTC CGATTAATCA ATGTGTCGAC AGCGGCTGCC
GAACGGATGC GGGTGCTGAT CAATGACCTG CTCGACTTTT CCCGCGTTGG TACCGATATC
GATTTTCAGA CGGTGGACCT CAACGAGGTT CTGGCCGAAA TCCTGGAGGA GCACCAAACC
GAAATACGGT CGACCGGGGC TTCGGTTGAT GTGGGCCCCC TCCCTACAAT CAGAGCCCAC
CGAACCGATT TGAAACAGGT ATTCCAGAAT CTTGTTACCA ACGGACTTAA GTATCGACGG
GCAGACGTTG TTCCCCATAT TCGAATACGG GCCACCGACG AAGGAAGTCA ATACCGGTTT
ACGGTCAGTG ATAACGGGAT TGGCATCGAT TCAAAATACT ATGATCGGGT ATTCCAGATT
TTTCAGCGGC TGCACGGTCG GAATGAATAC CCCGGAACGG GCATTGGTTT GGCTACCTGT
AAGAAAGTAA TCGACATTTA TGGCGGACAG ATCGGACTCA ACAGTACGGT AGGTGTGGGC
TCAACATTTT ATGTAGTAAT TCCAAAAGTT ATCAAGACAA GTCAGCATTA TGCCCAGACC
CATTCACTGT ATCCTGTTAA TTGA
|
|---|
| Protein sequence | MNEVIEFFQQ LANVNDWPPR WYCGRWTDFH GWLYIVSDLT IWLAYMAIPL ILIRFILVKK
GVPLSGVFVL FGAFILLCGL THLLDAIMFW WPAYRINALI RFCTAMVSIA TVLALIRYFD
EAVGLRTSKE YDRELSFRQQ AMQELTRSNE ELQQFAYIAS HDLQSPLKTI VNYLTLLESK
HGEKLDTDAV RLINVSTAAA ERMRVLINDL LDFSRVGTDI DFQTVDLNEV LAEILEEHQT
EIRSTGASVD VGPLPTIRAH RTDLKQVFQN LVTNGLKYRR ADVVPHIRIR ATDEGSQYRF
TVSDNGIGID SKYYDRVFQI FQRLHGRNEY PGTGIGLATC KKVIDIYGGQ IGLNSTVGVG
STFYVVIPKV IKTSQHYAQT HSLYPVN
|
|---|
| |