| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1986 |
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| Symbol | |
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| ID | 8725724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2396102 |
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| End bp | 2398228 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | polyribonucleotide nucleotidyltransferase |
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| Protein accession | YP_003386830 |
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| Protein GI | 284036900 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00363303 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00215529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTGAAA TCACCACGCA ATCCGTTGCG CTGCCCGACG GGCGGGAAAT TACCATCGAA
ACCGGAAAAC TGGCCCGACA GGCCGACGGC GCGGTGGTTG TACGGTTAGG CGACACGATG
CTGTTGGCCA CCGTCGTATC AAGTAAAGAC GCTAAAGAGG GCGTTGACTT TCTTCCATTA
TCCGTTGATT ATCAGGAGAA GTTCGCATCA GCTGGCCGTA TTCCCGGCAG CTTCCAACGG
CGCGAAGGTC GTTTGGGCGA TCACGAAATC CTGATTAGCC GTTTAGTAGA CCGTGCCCTG
CGGCCTATAT TTCCTGATAA CTACCACGCT GACACGCAGG TGATGATCAC GTTGATCTCT
GCCGACCCTG AAGTACAGCC CGATGCCCTG GCGGCTTTGG CGGCTTCGTC GGCGCTGGCC
GTGTCCGACA TTCCATTTAA CGGGCCTATT TCTGAAGTAC GTGTCGCTAA AATCGACGGG
CAGTACAAGA TCAACCCGAA AACGGCTGAA CTTGAGCGTG CAACCATCGA CCTGATCGTT
GCCGCTACCG AAAAAGATAT TTGCATGGTA GAAGGTGAGA TGGACGAATG TTCAGAAGCC
GAAGTTGTGG AAGCTCTTAA GGTAGCCCAC GAAGCCATCA AAATACAATG CCAGGCCCAG
AAAGAACTCG AAGCGAAAGT TGGTAAGACC GTTAAGCGGG AATATAACCA CGAAACGCAC
GACGAAGAAC TCCGGGCCGC TGTGCGCGCT GCCACCTACG ACAAAATTTA TGAAGTAGCC
CGTCGGCAGA ATCCAAGTAA AAAAGGTCGT TCGGAAGGGT TTAAAGCCGT CCGTGATGAA
TATTTAGCTT CCTTCCCGGA AGGAGCAGAG GTAAATGTTG GTCTGATCAA GACCTACTTC
CACGACCTCG AATGGGAAGC TTCCCGCCGG TTGGTACTCG ACGAGCGGAC CCGTTTGGAT
GGCCGTAAAC TGGATCAGAT TCGGCAAATT TCGGCGGAAG CCGGTTATTT GCCGGGTCCA
CACGGATCGG CTTTGTTCAC CCGTGGTGAA ACCCAGTCGC TGACAACCGT AACACTCGGT
ACCAAAACGG ACGAGCAGAT TGTTGATCAG ACGATGTTCC AGGGCTACAG CAAATTCCTG
CTGCATTATA ACTTTCCCGG TTTCTCAACC GGCGAAGTAA AGCCTAACCG GGGTGCGGGT
CGTCGTGAAA TTGGTCATGG AAACCTGGCG CACCGTTCGC TGAAAAAGGT ACTTCCGCCA
GCCGAAGAAA ACCCATACAC CATCCGGATC GTATCCGACA TTCTCGAATC GAACGGCTCG
TCGTCTATGG CTACCGTATG TGCCGGTACG ATGGCGCTGA TGGATGCCGG GATTAAAATC
AAGGCTCCCG TTGCCGGCAT TGCGATGGGC TTGATCTCGG ATGGCGACAA ATACGCCGTT
TTATCCGATA TTCTGGGTGA TGAAGATCAC CTGGGCGATA TGGACTTCAA GGTTACAGGT
ACCGAAAAAG GAATCGTCGC CTGCCAGATG GACCTGAAAG TGGATGGTCT GTCTTATGAA
GTGCTGGCTC AGGCATTGGA ACAGGCTCGT GTTGGTCGTC TGCATATCCT CGGCGAAATG
AAGAAAGGCA TTTCCGATGT GCGTTCCGAT CTGAAACCAC ATGCACCCCG TGCCATGGTT
ATCAAAATCG ATACCAACCA GATTGGTGCC GTTATCGGAC CCGGCGGTAA AGTTGTTCAG
GATATCCAGA AAGATTCCGG TGCTGTTGTG AACATCGACG AGCACGACAA TGCGGGTTGG
GTCAGCATTT TTGCTACCAG CAAAGAAAGC ATGGACAAAG CCGTTTCCCG TGTGAAAGGG
ATCGTTGCGG TTCCCGAAGT GGGTGAAACG TACGTTGGCA AAGTGAAGAC GATTCAGCCT
TTTGGGGCCT TCGTTGAATT CATGCCAGGA AAAGATGGTC TTTTGCACAT TTCCGAGATT
AAGTGGGAGC GTCTGGAAAC CATGGACGGT GTTCTGCAAG TCGGTGAAGA GGTGACGGTA
AAGTTGATTG ACGTTGATAA AAAGACCGGA AAGTACCGAT TATCGCGTAA AGTTTTGCTG
CCGAAACCAG AGAACAAAAA TGCGTAA
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| Protein sequence | MFEITTQSVA LPDGREITIE TGKLARQADG AVVVRLGDTM LLATVVSSKD AKEGVDFLPL
SVDYQEKFAS AGRIPGSFQR REGRLGDHEI LISRLVDRAL RPIFPDNYHA DTQVMITLIS
ADPEVQPDAL AALAASSALA VSDIPFNGPI SEVRVAKIDG QYKINPKTAE LERATIDLIV
AATEKDICMV EGEMDECSEA EVVEALKVAH EAIKIQCQAQ KELEAKVGKT VKREYNHETH
DEELRAAVRA ATYDKIYEVA RRQNPSKKGR SEGFKAVRDE YLASFPEGAE VNVGLIKTYF
HDLEWEASRR LVLDERTRLD GRKLDQIRQI SAEAGYLPGP HGSALFTRGE TQSLTTVTLG
TKTDEQIVDQ TMFQGYSKFL LHYNFPGFST GEVKPNRGAG RREIGHGNLA HRSLKKVLPP
AEENPYTIRI VSDILESNGS SSMATVCAGT MALMDAGIKI KAPVAGIAMG LISDGDKYAV
LSDILGDEDH LGDMDFKVTG TEKGIVACQM DLKVDGLSYE VLAQALEQAR VGRLHILGEM
KKGISDVRSD LKPHAPRAMV IKIDTNQIGA VIGPGGKVVQ DIQKDSGAVV NIDEHDNAGW
VSIFATSKES MDKAVSRVKG IVAVPEVGET YVGKVKTIQP FGAFVEFMPG KDGLLHISEI
KWERLETMDG VLQVGEEVTV KLIDVDKKTG KYRLSRKVLL PKPENKNA
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