Gene Slin_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1971 
Symbol 
ID8725708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2381714 
End bp2382187 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content51% 
IMG OID 
ProductDNA repair protein RadC 
Protein accessionYP_003386815 
Protein GI284036885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0853114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.044132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAC TGACCCTGCA ATCGCTGTTC AAAGTCAACG AAGTCGAGAT CATTTACCGC 
AACACAACAC CGTATCAGGA CCGGATTCAA ATCCGGTCAT CGGCCACTGC CTATGAAATC
CTGTTAGCGT CATGGGATCA GAACCGGCTA GATATGGTCG AACAGTTTAA AATCCTGTTG
CTCGATCAGC AAAATAACTG CCTGGCCGTT TCTGAAATAG CCACTGGCGG CACTTCAGCC
TGTCTGGCCG ATCCAAAAGT CATTTTTGCC ACGGCTCTGA AAACCCGTGC CACTGGCATC
ATTCTGGCCC ACAACCACCC CAGCGGCAAT CTCGCTCCCA GCGAGGCCGA TAAGTCACTT
ACCCGTAAAT TGAAAGACGG CGGCAAATTG CTCGACATTG CCGTTCTCGA TCATCTGATT
GTGACGAGCC ACAACTACCG CTCGTTTGCC GATGATGGAT TGATGCCGGG ATAA
 
Protein sequence
MDQLTLQSLF KVNEVEIIYR NTTPYQDRIQ IRSSATAYEI LLASWDQNRL DMVEQFKILL 
LDQQNNCLAV SEIATGGTSA CLADPKVIFA TALKTRATGI ILAHNHPSGN LAPSEADKSL
TRKLKDGGKL LDIAVLDHLI VTSHNYRSFA DDGLMPG