| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1963 |
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| Symbol | |
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| ID | 8725700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2373382 |
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| End bp | 2375433 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | Pseudomurein-binding repeat protein |
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| Protein accession | YP_003386807 |
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| Protein GI | 284036877 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0186142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.027049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA GTAAAGCCAT ACCTTCCGTT ACCGTAAACT ATAAAAGTAC TGGTAGCTCA
ACCACATCAA ACGAACTGGG CATGCGCGCC ATGCAGGAGC GTGCCTATGA AAAGCGCGGA
GAGCAATATT TGCTGATCAA ATCTCCCCCT GCGTCTGGGA AGAGCCGAGC CTTGATGTTT
ATTGCCCTTG ATAAGCTAAA TAATCAGGGG ATCAAACAAG CGATCATCAC CGTGCCGGAA
AAATCTATCG GATCAAGTTT TGCCGATGAG CCTCTGACCA AGTTTGGATA TTACTATGAT
TGGCATGTAA AACCCAAATG GAACCTATGT AATGCACCCG GTGAGGACGG TAGTAAAGTC
AATTCTGTCA AATCTTTCCT TGAGAGTGAA GATAAGGTGC TGGTTTGCAC ACACGCAACC
TTTCGTTTTG CCGTGGAACG TTTGGGAATT GAAGCTTTTG ACAACCGGCT GATCGCGATA
GATGAGTTCC ATCATGTCAG TGCGGATGAG GAGAGTGTCC TTGGTTCACA ACTCAAACAA
CTCGTTGCAC GAGACAAGAT ACATGTCGTA GCCATGACCG GCTCTTATTT TCGGGGCGAT
GCTAACCCTG TTTTGATGCC AGAAGATGAG GCTAAGTTTG ATACTGTCAC TTATACTTAC
TATGAACAAC TCAATGGTTA TGAGTATTTA AAGACACTCA ATATCGGCTA CTACTTTTAT
AGCGGGGCCT ACGCTGATGA AATTTTAAGT GTCCTTAACC CGAATGAGAA AACGATCATT
CATATTCCGA ACGTTAATTC CCGCGAGAGT ATGGGGGATA AAATCAAGGA GGTTGAGCAC
ATCATAGAAG CGCTGGGAGA CTGGCAGGGC GTTGATCCAG ATACAGGCTT TCATTTGGTT
AAAACGCCGG ATGGCAAAAT TTTACGGATC GCTGATTTAG TGGATGATGA TGCAGCAAAG
CGCAATAAAG TGGCTGCCTC ATTGAAACGC TCAGAGGCTA AGCAGAACCG TGACTTTGTC
GATATTATTA TCGCACTAGG CATGGCCAAA GAAGGCTTCG ACTGGATATG GTGCGAGCAT
GCCCTAACGA TTGGCTATAG ATCCAGCTTA ACTGAAATCG TACAGATTAT CGGACGCGCT
ACACGGGATG CACCCAACAA AACCCAGACA CGCTTCACGA ACCTGATTGC TGAACCGGAT
GCTTCGGAAG ACGCTGTGAC GGATGCTGTC AATGATACGC TTAAAGCCAT CTCCGCTAGC
TTGTTAATGG AACAAGTCTT GACACCGAGA TTTAATTTCA CACCAAAGAA CCCACAAAAT
GGACCGGTTG AGGGATTTGA TTACGGTGAG GGGGGGTATG ACCCGGATAA AGAAAACGTC
GGATTTAACG AGCAAACCGG TCAGTATCAA ATCGAGATAA AAGGGCTTTC TGCGCCGAAA
AGCCAGGATG CACAGCGTAT TTGCCAAGAA GATCTCAATG AGGTGATTGC GGCTTTTGTC
CAAGACAAGC CAACCTTGGA ACGTGGCCTG TTCGACGATG AGTTAGTGCC GCAAGAGCTG
ACTCAGGTTC GGATGGGAAA GATCATAAAG GATAGATATC CGGATCTGGA TGACGAGGAT
GTCGAAGCCG TCAGGCAACA TGCGATTGCG GCATTGAACC TGACGCAAAA GGCCAAAGAA
ATTATTAATA ATGATAGTGA ATTAAGCACT CGCGGCAATA CCGCCTTGAT TGACGGGGTC
CGAAAATTTA CAATGGATGT ACGCGATCTG GATGTTGACT GGATTGATAG TATCAATCCA
TTTAGCGAAG CCTATGCCAT CTTATCCAAG GCTATGACAG AGCAAAGTCT GAAGGCAATG
GCAGAAGTGA TTTCGGGCAG AAAACCGAAT ATATCGTTAG ATGAAGCGCG GGAACTTGCT
AAAAGGGCTT TGAAATTTAA GAAAGAACGG GGCAGACTGC CGGATATTAA ATCCAGTGAT
CCCTGGGAAC AACACATGGC GCAAGGTGTT GCATTTCTAG CGCGTATGAA AGCAGAAGAA
AAAAATGGCT AA
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| Protein sequence | MTDSKAIPSV TVNYKSTGSS TTSNELGMRA MQERAYEKRG EQYLLIKSPP ASGKSRALMF
IALDKLNNQG IKQAIITVPE KSIGSSFADE PLTKFGYYYD WHVKPKWNLC NAPGEDGSKV
NSVKSFLESE DKVLVCTHAT FRFAVERLGI EAFDNRLIAI DEFHHVSADE ESVLGSQLKQ
LVARDKIHVV AMTGSYFRGD ANPVLMPEDE AKFDTVTYTY YEQLNGYEYL KTLNIGYYFY
SGAYADEILS VLNPNEKTII HIPNVNSRES MGDKIKEVEH IIEALGDWQG VDPDTGFHLV
KTPDGKILRI ADLVDDDAAK RNKVAASLKR SEAKQNRDFV DIIIALGMAK EGFDWIWCEH
ALTIGYRSSL TEIVQIIGRA TRDAPNKTQT RFTNLIAEPD ASEDAVTDAV NDTLKAISAS
LLMEQVLTPR FNFTPKNPQN GPVEGFDYGE GGYDPDKENV GFNEQTGQYQ IEIKGLSAPK
SQDAQRICQE DLNEVIAAFV QDKPTLERGL FDDELVPQEL TQVRMGKIIK DRYPDLDDED
VEAVRQHAIA ALNLTQKAKE IINNDSELST RGNTALIDGV RKFTMDVRDL DVDWIDSINP
FSEAYAILSK AMTEQSLKAM AEVISGRKPN ISLDEARELA KRALKFKKER GRLPDIKSSD
PWEQHMAQGV AFLARMKAEE KNG
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