| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1932 |
|---|
| Symbol | |
|---|
| ID | 8725669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2337148 |
|---|
| End bp | 2338533 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003386776 |
|---|
| Protein GI | 284036846 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAC TTGCCCGCTC TCTGGACCTC CGCTCCGCTA TCTTATTGGT GGTGAGCAGC
ATTATCGGCT CTGGTGTTTT CAAGAAAGTA GCGCCGATGG CCGCTGAGCT AGGCTCCCCA
CTGTTGGTAA TTGGCTGCTG GATCGTAGCC GGGATGATTA GTCTGGCCGG GGCACTGACC
TATGCTGAAA TGGCGGGCAT GTTTCCGCAA TCAGGGGGTG AATATGTTTA TTTTAAAAAG
GTATACGGGC GTTTGTTTGC CTTCCTTTAC GGCTGGGGTG CCTTTACCGT CATGCGAACG
GCAACCATAG CCGCTCTGGC GCACGTTTTC GGACAGTCTC TGATAACGTT CACGGGGGCA
GGCGGAGCAT CTCCCGAAGG GGTGGTCAAG TGCATTGCCA GCGTGCTGAT CGTGTTTTTG
AGTTTTGTGA ATTACCGGGG GGTATCCTTT GCGGAGGGAC TTAGCCGGGG GCTTATTTAC
CTGATATTTC TGGCCGTACT CATCATCGCT GTACTGGGCT TTCAGGCCGC ATCCGGACAG
GTTGACCACA TCACTCAGGC CATACCGAAT TTTGTACCCA ATGAGCACCG CACGCTGCTC
GGCTCGCTGG TTATTGCTTC GCTGGGAGCC TTTTGGGGGT ACGAAGGCTG GAATCAGATC
GGCTACATCG GCGAAGAGAT AAAAAATCCG CAGCGTAGTT TACCCATCTC CCTGAGCCTG
GGCACCACCA TCGTTGTCAG TATTTATGTG TTGCTGAATG TGGTTTATCT GTATGTGTTG
CCCATTGAAG CCCTGGCCCA ACTCGCCGGT ACACCCGATA AAATTGCGGC TGTCGAAGTG
GTACGGCAGG CCGCTGGCTG GGTTGGTGCT CTATTTATCT CGGTCCTGAT TCTGGTCACA
ACCACGAATG CAACCAACGC ATCCATCCTA ATGCCCGCCC GCCTTTTTTA CGCGATGGCG
CGGGACGGCT TATTTTTCAA GTCCGTCGCG GTCATTCACC CCCGATTCAA AACGCCATCC
ATCGCCATTC TGCTTCAGGG GACCTGGTCA ATCATCCTGG TTTGGTCGGG GAGTTTCGAT
CAGTTGACCG ACACGCTGGT CTTTTCTTCG TTTATTTTCT ACGGTGCTAC GGCGCTGGGA
GTCATTCTAC TCCGGTTCAA ACAACCGCAT CTGGAAAGGC CCTATCGGGT TGTTGGCTAT
CCTGTTGTGC CGCTGTTTTT CCTGGCCTGC TGTACGTTGT TGGTCGTTAT GACCCTGCTC
AATCAACCCC GAGAAGCCCT GACGGGCCTT GGCCTGATTG CCACCGGATT GCCCTTCTAT
TGGTACTGGC AGTCAAAACC ACCCATTGCC GAGTCGGACC CGGTTGATGT AGCCGATGTT
CATTGA
|
|---|
| Protein sequence | MTKLARSLDL RSAILLVVSS IIGSGVFKKV APMAAELGSP LLVIGCWIVA GMISLAGALT
YAEMAGMFPQ SGGEYVYFKK VYGRLFAFLY GWGAFTVMRT ATIAALAHVF GQSLITFTGA
GGASPEGVVK CIASVLIVFL SFVNYRGVSF AEGLSRGLIY LIFLAVLIIA VLGFQAASGQ
VDHITQAIPN FVPNEHRTLL GSLVIASLGA FWGYEGWNQI GYIGEEIKNP QRSLPISLSL
GTTIVVSIYV LLNVVYLYVL PIEALAQLAG TPDKIAAVEV VRQAAGWVGA LFISVLILVT
TTNATNASIL MPARLFYAMA RDGLFFKSVA VIHPRFKTPS IAILLQGTWS IILVWSGSFD
QLTDTLVFSS FIFYGATALG VILLRFKQPH LERPYRVVGY PVVPLFFLAC CTLLVVMTLL
NQPREALTGL GLIATGLPFY WYWQSKPPIA ESDPVDVADV H
|
|---|
| |