Gene Slin_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1875 
Symbol 
ID8725612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2265143 
End bp2265586 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386719 
Protein GI284036789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0842968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG CCCTGATTTC GCTGCTTATT AGCCTGATAA CGCTGGCCCC GAACTGGATA 
TTAAATTTTG ACCAGGCGAA AACCGAAGCA ACCCAATCGC ATAAATTGAT ACTACTTAAC
TTTTCAGGTT CGGACTGGTG CGGACCCTGT ATCAAACTCA AGAAAACAAT TTTTGAATCG
GCCGAATTCG GCCAGTATGC CGATGAGCAT CTGGTACTCG TCCGCGCAGA CTTCCCCAGA
CTATCTAAAA ATCAGCTGGA CGCCCGGCAA ACTGCTCATA ACGAGTCGCT GGCAGAGAAG
TACAATAAAC AGGGAAAATT CCCTTTTACG GTATTGCTGG ATGCCAGTGG CAAGGTGCTG
AAAGAGTGGG ATGGCTACCC TCAATCGCTG ACCATTCCCG GCTTCATCGA CGCTATCCAG
ACGGCTACCC CCGCATCGAA ATGA
 
Protein sequence
MKLALISLLI SLITLAPNWI LNFDQAKTEA TQSHKLILLN FSGSDWCGPC IKLKKTIFES 
AEFGQYADEH LVLVRADFPR LSKNQLDARQ TAHNESLAEK YNKQGKFPFT VLLDASGKVL
KEWDGYPQSL TIPGFIDAIQ TATPASK