Gene Slin_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1813 
Symbol 
ID8725550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2188994 
End bp2189845 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386657 
Protein GI284036727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.307669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTA TTGGACGAAT AAATACCCTG ACAGCCCTGC GCGAAACAAG CGTTGGGTTT 
TTCCTTGGCG ACCTGTCGGA TCGACGGACG CAGGACTTCA ACAACGATAT ACTGTTGCCC
AACAAATACG TACCCGATAC GCTTGCCGTC GACGACGATA TTGATGTGTT CGTGTATACC
GATTCGGAAG ACCGACCCAT TGCCACAACT CTGACACCAG CCATCCAGCG GGATGAGTTT
GCCAGTTTAC AGGTAGTGGC GGTTACCAGC GCGGGTGCTT TTCTGGACTG GGGGCTCGAA
AAAGATTTAC TGGTGCCCCA CCGCGAACAG GCCCGGCCTA TGGAAGTGGG CCAGTGGTAC
GTTGTCTTTA TGTACCTCGA TGAAAGTACA AACCGGCTGG TAGCGTCGAG TAAAGTAAGT
CGCTTCCTGG ACGAAGACGT ACGCGATCTG CAAGTTGGCG ATGAAGTACA GCTGCTGGCC
TACGAACTAA CCGACCTCGG GGTCAATGTA ATTATCAATA ACCGATATAA AGGGCTGGTA
TACAGTAATG AAATCTTCCG GACGGTCCGC CCCGGTGATC CGCTGATTGG GTATATCAAG
AATATTCGGG ATGATAACCG GGTGGATGTA AGTCTGCAAC GGATGGGCTA TGAGAACGTG
GAGCCCAACG CCCGGCGCAT TCTGGCTACA CTGAAAGCCG AGAATGGTTT TCTGCCCCTA
ACGGATAACA CCTCGCCCGA AGTAATTTAT GAAACGCTCG AAATGAGCAA GAAAACGTTC
AAGAAAGCCA TCGGAACGCT GTATCGGGAG CGTAAAATCG TTCTGGAAGA GAAAGGCATC
CGGCTGGTTT AA
 
Protein sequence
MITIGRINTL TALRETSVGF FLGDLSDRRT QDFNNDILLP NKYVPDTLAV DDDIDVFVYT 
DSEDRPIATT LTPAIQRDEF ASLQVVAVTS AGAFLDWGLE KDLLVPHREQ ARPMEVGQWY
VVFMYLDEST NRLVASSKVS RFLDEDVRDL QVGDEVQLLA YELTDLGVNV IINNRYKGLV
YSNEIFRTVR PGDPLIGYIK NIRDDNRVDV SLQRMGYENV EPNARRILAT LKAENGFLPL
TDNTSPEVIY ETLEMSKKTF KKAIGTLYRE RKIVLEEKGI RLV