Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1768 |
Symbol | |
ID | 8725505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2132402 |
End bp | 2134084 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386612 |
Protein GI | 284036682 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.143004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.714644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCT TCCATAAAAA TAAATTTCTA ACCACGGCCT GTTTAACGGT AGCGCTCCTG AGCGGAGTAT CCTGTAAAGA GCAACTGGAC GTTGGTAACC CGAATGCGCC TACTACAGCG GCCAACGTCA ATACCGAAGC GGGGATCATC TCGTTTGCCC AGGGTGGCGT TTATGTCAAT GGTTTTTACA ACGGGGACGA CTGGCTGGGG AACAGCTATT TTTCACTACC CTGGGGCTAT AGCGAACTAA TGGCAGATAA CCTCGGTGCC GATGCATCCA ACAACCAGAT TACTACCATT GGCGTACCCG ATTACATCAT TCTGGATGAC GGCACCAAGG TAAGCAACCC GTCTCCGCAG GTGAGCATTA TCCGGTCTTA TAACAGTCGG GCAGCCACGG CTGCGGGAAA TAATCCCCTA TACTACCAGT GGCTGAATAT GTACGCGCTC AACAATGCCT GCAACCAAAC GCTGGATCTG GTAGGCACTA TCCCTTTTGC GGGCGATGCC GCCAGCCGCT CCAACACGAT AAAAGCCTGG GCCTACTGGT GGAAAGGCTA TGCGTATGCC TCCATCGGGT CGATGTATTA TGCGGGGCTG ATTGAAGACA AGGCGGGCGT AACCAATGGC AACTATGTGT TGCATGATGC CATTATTAAT CAGTCGAATA CCTATTACAA TCTGGCCGCT ACAACCCTGG GGTCGATCAC CAGCAACAGC GATTATCAGG AGGTGATTTC GCAGTTGATA CCGGCGTTTA CGCAGGTGGG CAACGGGGGC GTTCCTACCA TCGACATGTG GAAACGGAAC ATCAATACGA TGCTGGCCCG AAACATTCTG GTCAATAAAC TGGCTCCTTT TGTGAATGGT AATCCGGCGG CCACCATTAC CAAATCATCG ACAACTGCCA TGACTCCGGC CGACTGGAAC AGCGTTCTGA CGCTGGCTAC TGCGGGAGTT CAGCGGGGCG ACGTCGTCTT TACCGGACGC AGCACGCCCT CTAACTTTTT CTTCTCGGCT TCCGGCGGAA CAACGGCCGC GCTTACCACG GGGGTAAATA CGTCGACTAC CTTCAAGATA AGCGAGCGAT TTATCCAATC CTTCAATGCG GGCGACAAAC GACTGGCCAA TAACTTCAAT ACCAACACGA CTTACAAAAA CAACTATACG TTTACTACCC GGTATAGCTT GACGGCCAAT GGCAATGGCA TGCCTGGCGT GTACGTGTAC GGTACCAAAG ATGTGGGGGC TTATGAACTT TACATTGCGG GCAGTTACGA GGAGAACCAA CTGATGCTGG CCGAAGCCAA CATCAGGCTC GGCAACATCG AAACCGGTCT TGGGTATATC GATGCGGTCA GAACGTATCA GGGTGCAGGG GTAGCCGCCG TAAAAGGAAC CGGCTTAACG CTGGCCGGAG CGCTCACCGA ACTGACCAAA GAACGACGAG TCGCTTTGTT TGGGCGGGGG CTGGGCTTCT ACGATAACCG GCGCTGGGGC TGGACGTACG ACATCTCCGT TGGTGGGGGT AGCTATGGCA ATACGCTGGT AACCACGGCA GGAGTAGTCA ATAAGAATGT CACGATCAAC TACAACTTCA TGGATTACTG GGACGTACCC GCCGATGAAG CCGTATTAAA TCCAACGACC TCCAGCGTGG CGACCCAAAA CCCGAATTAT TAG
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Protein sequence | MKLFHKNKFL TTACLTVALL SGVSCKEQLD VGNPNAPTTA ANVNTEAGII SFAQGGVYVN GFYNGDDWLG NSYFSLPWGY SELMADNLGA DASNNQITTI GVPDYIILDD GTKVSNPSPQ VSIIRSYNSR AATAAGNNPL YYQWLNMYAL NNACNQTLDL VGTIPFAGDA ASRSNTIKAW AYWWKGYAYA SIGSMYYAGL IEDKAGVTNG NYVLHDAIIN QSNTYYNLAA TTLGSITSNS DYQEVISQLI PAFTQVGNGG VPTIDMWKRN INTMLARNIL VNKLAPFVNG NPAATITKSS TTAMTPADWN SVLTLATAGV QRGDVVFTGR STPSNFFFSA SGGTTAALTT GVNTSTTFKI SERFIQSFNA GDKRLANNFN TNTTYKNNYT FTTRYSLTAN GNGMPGVYVY GTKDVGAYEL YIAGSYEENQ LMLAEANIRL GNIETGLGYI DAVRTYQGAG VAAVKGTGLT LAGALTELTK ERRVALFGRG LGFYDNRRWG WTYDISVGGG SYGNTLVTTA GVVNKNVTIN YNFMDYWDVP ADEAVLNPTT SSVATQNPNY
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