Gene Slin_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1768 
Symbol 
ID8725505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2132402 
End bp2134084 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386612 
Protein GI284036682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.143004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.714644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT TCCATAAAAA TAAATTTCTA ACCACGGCCT GTTTAACGGT AGCGCTCCTG 
AGCGGAGTAT CCTGTAAAGA GCAACTGGAC GTTGGTAACC CGAATGCGCC TACTACAGCG
GCCAACGTCA ATACCGAAGC GGGGATCATC TCGTTTGCCC AGGGTGGCGT TTATGTCAAT
GGTTTTTACA ACGGGGACGA CTGGCTGGGG AACAGCTATT TTTCACTACC CTGGGGCTAT
AGCGAACTAA TGGCAGATAA CCTCGGTGCC GATGCATCCA ACAACCAGAT TACTACCATT
GGCGTACCCG ATTACATCAT TCTGGATGAC GGCACCAAGG TAAGCAACCC GTCTCCGCAG
GTGAGCATTA TCCGGTCTTA TAACAGTCGG GCAGCCACGG CTGCGGGAAA TAATCCCCTA
TACTACCAGT GGCTGAATAT GTACGCGCTC AACAATGCCT GCAACCAAAC GCTGGATCTG
GTAGGCACTA TCCCTTTTGC GGGCGATGCC GCCAGCCGCT CCAACACGAT AAAAGCCTGG
GCCTACTGGT GGAAAGGCTA TGCGTATGCC TCCATCGGGT CGATGTATTA TGCGGGGCTG
ATTGAAGACA AGGCGGGCGT AACCAATGGC AACTATGTGT TGCATGATGC CATTATTAAT
CAGTCGAATA CCTATTACAA TCTGGCCGCT ACAACCCTGG GGTCGATCAC CAGCAACAGC
GATTATCAGG AGGTGATTTC GCAGTTGATA CCGGCGTTTA CGCAGGTGGG CAACGGGGGC
GTTCCTACCA TCGACATGTG GAAACGGAAC ATCAATACGA TGCTGGCCCG AAACATTCTG
GTCAATAAAC TGGCTCCTTT TGTGAATGGT AATCCGGCGG CCACCATTAC CAAATCATCG
ACAACTGCCA TGACTCCGGC CGACTGGAAC AGCGTTCTGA CGCTGGCTAC TGCGGGAGTT
CAGCGGGGCG ACGTCGTCTT TACCGGACGC AGCACGCCCT CTAACTTTTT CTTCTCGGCT
TCCGGCGGAA CAACGGCCGC GCTTACCACG GGGGTAAATA CGTCGACTAC CTTCAAGATA
AGCGAGCGAT TTATCCAATC CTTCAATGCG GGCGACAAAC GACTGGCCAA TAACTTCAAT
ACCAACACGA CTTACAAAAA CAACTATACG TTTACTACCC GGTATAGCTT GACGGCCAAT
GGCAATGGCA TGCCTGGCGT GTACGTGTAC GGTACCAAAG ATGTGGGGGC TTATGAACTT
TACATTGCGG GCAGTTACGA GGAGAACCAA CTGATGCTGG CCGAAGCCAA CATCAGGCTC
GGCAACATCG AAACCGGTCT TGGGTATATC GATGCGGTCA GAACGTATCA GGGTGCAGGG
GTAGCCGCCG TAAAAGGAAC CGGCTTAACG CTGGCCGGAG CGCTCACCGA ACTGACCAAA
GAACGACGAG TCGCTTTGTT TGGGCGGGGG CTGGGCTTCT ACGATAACCG GCGCTGGGGC
TGGACGTACG ACATCTCCGT TGGTGGGGGT AGCTATGGCA ATACGCTGGT AACCACGGCA
GGAGTAGTCA ATAAGAATGT CACGATCAAC TACAACTTCA TGGATTACTG GGACGTACCC
GCCGATGAAG CCGTATTAAA TCCAACGACC TCCAGCGTGG CGACCCAAAA CCCGAATTAT
TAG
 
Protein sequence
MKLFHKNKFL TTACLTVALL SGVSCKEQLD VGNPNAPTTA ANVNTEAGII SFAQGGVYVN 
GFYNGDDWLG NSYFSLPWGY SELMADNLGA DASNNQITTI GVPDYIILDD GTKVSNPSPQ
VSIIRSYNSR AATAAGNNPL YYQWLNMYAL NNACNQTLDL VGTIPFAGDA ASRSNTIKAW
AYWWKGYAYA SIGSMYYAGL IEDKAGVTNG NYVLHDAIIN QSNTYYNLAA TTLGSITSNS
DYQEVISQLI PAFTQVGNGG VPTIDMWKRN INTMLARNIL VNKLAPFVNG NPAATITKSS
TTAMTPADWN SVLTLATAGV QRGDVVFTGR STPSNFFFSA SGGTTAALTT GVNTSTTFKI
SERFIQSFNA GDKRLANNFN TNTTYKNNYT FTTRYSLTAN GNGMPGVYVY GTKDVGAYEL
YIAGSYEENQ LMLAEANIRL GNIETGLGYI DAVRTYQGAG VAAVKGTGLT LAGALTELTK
ERRVALFGRG LGFYDNRRWG WTYDISVGGG SYGNTLVTTA GVVNKNVTIN YNFMDYWDVP
ADEAVLNPTT SSVATQNPNY