Gene Slin_1731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1731 
Symbol 
ID8725468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2080732 
End bp2081223 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386576 
Protein GI284036646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.282062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACA TGAACCCCCT TAACCTACCG GATGCGCAGT TACAGCAGTT GATTATGCTG 
GTCGTGGCGG CTGTGTTAGG CTTTATTATA GGGTATGTTT CCCGACGAAG CACCATTAAA
GAACTGGAAG GAAGTCTCGT CACAACAGAA CGCGATCTTG ACAATTGCTA TCGAAAAACG
CCCATTGTCG CCGGTACGAA CGATGAGGAG GCCATTGTAC TGAATCGTAT CCGGTCTCGT
TCGAGCGAAA TAAACTTCGG CCGGATTGGG ATGGCATCGG CTATCGATGC GGATAACCTT
AAAGTTATCG TTGGAATAGG ACCTTATCTG GAAAAAAAAC TGAATGCAAT TGGCATCTAT
ACATTCCGGC AGATTGCCAA TTTCGCACCC GAAGATATTG AGCAGGTAAA CGATATCATC
GAGTTTTTCC CCGGCCGTAT CGAACGGGAT AACTGGGTTG GGCAAGCTGC TGACCTGTTA
AACAAGAAAT AA
 
Protein sequence
MFDMNPLNLP DAQLQQLIML VVAAVLGFII GYVSRRSTIK ELEGSLVTTE RDLDNCYRKT 
PIVAGTNDEE AIVLNRIRSR SSEINFGRIG MASAIDADNL KVIVGIGPYL EKKLNAIGIY
TFRQIANFAP EDIEQVNDII EFFPGRIERD NWVGQAADLL NKK