| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1664 |
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| Symbol | |
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| ID | 8725399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2001099 |
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| End bp | 2002643 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | GH3 auxin-responsive promoter |
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| Protein accession | YP_003386510 |
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| Protein GI | 284036580 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.714218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTAC TAGGTAGTAT GCTCAAAAAC GGCATTCGGT TATCGAACGT CGTACGGCTG
CGGAAGTTCA ATGCCGTTCG TCAGCAGCGA AAGGTCTTCC GTAAGCTTAT TCGAAAAGCA
CAGTTTACGA AGTTTGGCGA AACCTATCAG TTCGATGATC TGCTCCGTTC GGTCGAGTTT
GGTACCGAAC GGGAGTTTTA TCAAAAATAC AAGCAGTTTG TCCCCATCCA CGACTACAAC
AAAATGTTTG ATGGCTGGTG GAAACGAACG CTGGCCGGCG ATCCGGATGT GACATGGCCG
GGAAAAGTAA AATACTTTGC CCTTAGCTCG GGCACATCCG AAGCCGCAAC GAAGTACATT
CCGGTAACGA AGGCAATGTC GAAAGCCATC CAGCGAACTA GTATCCGCCA GATCTTAACC
CTCGGCAAAT ACCAGAATCT GCCTTCAACA CTTTACGAAA AAGGCTGTCT GATGCTCGGC
GGCAGTACCG ACCTCAACGT TCGGGAAGGC CACTACGAAG GCGACCTGAG CGGCATTACC
GCCAGCAAAC TTCCCCTCTG GTTCGAGCGG TTTTATAAGC CCGGCCGCGA CATTGCCCAG
GAACGCGACT GGGCGCATAA ACTGGACGAA ATTACGGAGC AGGCCGCTAG TTGGGATATT
GGCTATGTGG TGGGTGTACC GGCCTGGATA CAGTTGCTGA TGGAAAAAAT CATTGCCCGT
TACAACGTCA AAACCATCCA CGACATCTGG CCGAACCTGA TGGTATTCTG CCACGGGGGC
GTATCTTTTG AACCGTACCG CCAGGGGTTC GAGAAGCTTC TGGCTCACCC GATCACGTAC
ATCGAGACGT ATCTGGCCTC GGAGGGCTTC ATCGCTTACC AAACCCATCC CGATGCGGAG
GGAATGCAAC TGGTGCTGAA CAACGGACTG TTCTTTGAAT TTATCCCCTT CAACGAACAT
AACTTCAGTG CCGATGGCGA ACTCATTGAT AAGCCCGAAA CCCTGATGAT TGATGAGGTT
GAGGAAGGCA GAGAATACGC ACTTCTGATT TCAACCTGCT CTGGTACCTG GCGTTATTTG
ATTGGCGACA CCATTCGGTT TGTTAATAAA CAACGCGCCG AAATTGTTAT TACGGGCCGT
ACCAAGCACT TCCTGAGCAT GTGTGGCGAA CACCTGTCGG TCGACAATAT GAACAAGGCA
ATTGAAATGG TTTCCGACGA TCTGGACATT TCGATCCGTG AGTTTACCGT GGCCGGGGTG
GCCCATGACA CATTATTTGC CCACCACTGG TACATAGGCA CCAACGATAC CGTCGACGCC
AACGACCTTC GCGATCGGCT CGACGCCAAA CTCAAGGAAC TCAACGACGA CTATGCCGTT
GAGCGGAAGC ATGCTTTAAA AGACGTCCGC GTAACGGTAC TGCCCACCAA AACCTTTTAT
GACTGGATGG AAGCCCGTGG TAAAATGGGC GGTCAAAACA AATTCCCCAG AGTCCTGAAA
AAAGGGATGA TCGCCGAGTG GGAAGCGTTT TTGGCTAAAG CGTAA
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| Protein sequence | MALLGSMLKN GIRLSNVVRL RKFNAVRQQR KVFRKLIRKA QFTKFGETYQ FDDLLRSVEF
GTEREFYQKY KQFVPIHDYN KMFDGWWKRT LAGDPDVTWP GKVKYFALSS GTSEAATKYI
PVTKAMSKAI QRTSIRQILT LGKYQNLPST LYEKGCLMLG GSTDLNVREG HYEGDLSGIT
ASKLPLWFER FYKPGRDIAQ ERDWAHKLDE ITEQAASWDI GYVVGVPAWI QLLMEKIIAR
YNVKTIHDIW PNLMVFCHGG VSFEPYRQGF EKLLAHPITY IETYLASEGF IAYQTHPDAE
GMQLVLNNGL FFEFIPFNEH NFSADGELID KPETLMIDEV EEGREYALLI STCSGTWRYL
IGDTIRFVNK QRAEIVITGR TKHFLSMCGE HLSVDNMNKA IEMVSDDLDI SIREFTVAGV
AHDTLFAHHW YIGTNDTVDA NDLRDRLDAK LKELNDDYAV ERKHALKDVR VTVLPTKTFY
DWMEARGKMG GQNKFPRVLK KGMIAEWEAF LAKA
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