Gene Slin_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1648 
Symbol 
ID8725383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1981492 
End bp1981866 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386494 
Protein GI284036564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.563063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCA ATAGCCGTTT TCATAGTATT TTATATAATA AATGCCCGCG TTGCGGAGAA 
GGTGATTTCT TCGTCAGGAA AAGTGCATTC ACGCGCGATT TTGACAAAAT GAATGAACAC
TGCCCCCATT GTGGGGAGAA TTTTATGCCC GAGCCTGGTT TCTACTGGGC ATCTATGTTT
GTCAGTTATG CGTTTTATAC CATCTACACG CTGCTTACGT TCTTCATTTT TGTTCAGGGG
TTGGGCGTCG ACCTCGATTA TTATCTGATT GGACTGGTGC CAACGCTGAT CGCCTTGACT
CCGTACTTTT TCAGACTGGC CCGCCGAACC TGGTTATCCA TTTTCATCGC ACCTAAACAG
GTATCCCGTT TGTAG
 
Protein sequence
MSANSRFHSI LYNKCPRCGE GDFFVRKSAF TRDFDKMNEH CPHCGENFMP EPGFYWASMF 
VSYAFYTIYT LLTFFIFVQG LGVDLDYYLI GLVPTLIALT PYFFRLARRT WLSIFIAPKQ
VSRL