| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1597 |
|---|
| Symbol | |
|---|
| ID | 8725331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1924952 |
|---|
| End bp | 1926904 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003386444 |
|---|
| Protein GI | 284036514 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.596223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGA AAAAGTCTTT ATCTCTTGTT AACCTGCTCC TGATTCATTC CAAACGAGCT
GTCATGGGTT GCGCCGTTAC GATGCTCTGC GCATTAAGCG CTGGTCATGT TCAGGCGCAA
TTCTGTTTTT CGCCGGAGAG GCCGCAGCTT GGGCAGGTCG TGTCCTTTAC ATACACTCCT
CAAACGACGC CCCTGGCCAG CGATAGCACG CTTGAAGGGC GTTATGTACG CTACGGAGCC
CCAAATGTGA TTCAGCTCAG TCAGCCTGCA ACTGTTAAGC TGGTGCGGCA CGGCAACGAT
TTTGTCGGTG AGTTATTTAT TCCGCGTAAA GATGTGGCGG GCATGATGCT GCTATTTCGA
AACAGCAACC AACCCAAACG AACCGATCTG AACAACGGTC AGCTATACAT TATTCCGGTT
TGCGATGCCA GTGGACGGAT CGTACCCCAC GCTACCGGCG GTCAGGCATC GGTGTTTACC
CGCAGTCATT TCCTGTACGA ATCGGGCGCA CGTCCCGACC CCAACTGGGT CGTTACCCTG
TACGAGCATG AACTCGCCCA GAATCCAGAC CTTCATCCCT TTTACTGGTC AGATTTACTG
GCGGCTCAGG TAAAACAGAA GAAGCCGGGT TATGGACCCA AGGTAAAAGC CGACATCGAA
TCCTACCTGA CCTCCCGACC GACACCAACC ACCGCTGAAC TCACTACGGC AGCACAGCTC
TACGAAAGTC TGGGCGACTT TCCCAAAGCC AATGCCCTTC GTGAGCGGCA GAAGTTAGTA
GAGCCAACTG GCTCACTAGC GCAAAAAGAC CGGTCGATGG CTATCCGCAC CGAACCGAAC
TGGGAGCGTA AAAAAGCCGC CTATCAGGCG TTTGCAACTG AGTTCCCAAC CTCCTCTTAC
CTGCCCGCTC TGACGGTTAT GATGACCGAT GGCTATTTCA AAAACAATGA CATATCAGGA
TTGATCACTT TTGTGGAGAA CCAGCCAGCC TCCCATACGG ATGTGCTGAT GCTGAACACA
ATAGCGTTTC AGATGGCTGA TGAGCGACGG TCGTTACCCG AAGCCGAAAA ACTGATAAAC
CGGGCTATTG ATGTTCTCAA ATCACAACCG AAACCAAGAA CAGGGGCGAG TAACTGGGAA
GCCGAAAAAC TAACCCGGCA GCGTCAATTA CTGAATACCT ACGCCCGTGT GCGGGAGCAG
CAGGGCGATT ATGCCGGTGC GTACACGGCT TATCAGACAT TCATCGATCC CAACGATATT
GACAATACCG AACCCCGGCT TATCGAACGC TACTTCCAGT GTGCGCTCCA AACGAACCAT
GTTGCCGAAG CGCGCCCGGT AGCCGAAGCG GCAGTTCAGA TCGGAAAAGG AACATCCGGT
TTAAAAAGAG CCCTGCGCGA TTGGTACGCT AAACAACCGG GCAGCACACC CGCCAAAGCC
GATGCCTACC TAACCCAACT AGAGGCCGAT TTACGAGCCG ATCAGCGGGA CGAACTTCAG
CAATTACTGA TCAACGAACC AGCGCCAGCT TTCACGCTCA CCGATTTGCA GGGCCGTACT
ATTTCCTCGT CGGCCTTTAA AGGAAAAGTA ATTGTGCTGG ACTTCTGGGC AACCTGGTGC
GGTCCCTGCA TTGCTTCTTT TCCGGCTATG CAACAGGCGC AAACGCGGTT TCAGAACGAC
CCGAATGTGA AGTTTTTATT CGTCAACACC CGCGAAGGCG GCCCCGTGCA GCGCGTCCAT
AATTTTATGA GTAAACACCC TTATCCCTTT GTGGTGCCCC TCGACGGACA GCAGAAAGTG
GCCAATGCCT ATAAAGTACA GGGAATCCCG ACCAAAGTAG TTATTGGCCC GGATGGGCGC
GTGCGGTACC GCACCATTGG GTATTCCGGC AACCCCGAAT CGACGGTCAA CGAGTTGAGT
CTGGTTGTGG AGATGTTGAA AGAAGGGAAA TAG
|
|---|
| Protein sequence | MKTKKSLSLV NLLLIHSKRA VMGCAVTMLC ALSAGHVQAQ FCFSPERPQL GQVVSFTYTP
QTTPLASDST LEGRYVRYGA PNVIQLSQPA TVKLVRHGND FVGELFIPRK DVAGMMLLFR
NSNQPKRTDL NNGQLYIIPV CDASGRIVPH ATGGQASVFT RSHFLYESGA RPDPNWVVTL
YEHELAQNPD LHPFYWSDLL AAQVKQKKPG YGPKVKADIE SYLTSRPTPT TAELTTAAQL
YESLGDFPKA NALRERQKLV EPTGSLAQKD RSMAIRTEPN WERKKAAYQA FATEFPTSSY
LPALTVMMTD GYFKNNDISG LITFVENQPA SHTDVLMLNT IAFQMADERR SLPEAEKLIN
RAIDVLKSQP KPRTGASNWE AEKLTRQRQL LNTYARVREQ QGDYAGAYTA YQTFIDPNDI
DNTEPRLIER YFQCALQTNH VAEARPVAEA AVQIGKGTSG LKRALRDWYA KQPGSTPAKA
DAYLTQLEAD LRADQRDELQ QLLINEPAPA FTLTDLQGRT ISSSAFKGKV IVLDFWATWC
GPCIASFPAM QQAQTRFQND PNVKFLFVNT REGGPVQRVH NFMSKHPYPF VVPLDGQQKV
ANAYKVQGIP TKVVIGPDGR VRYRTIGYSG NPESTVNELS LVVEMLKEGK
|
|---|
| |