Gene Slin_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1547 
Symbol 
ID8725281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1863198 
End bp1864352 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386395 
Protein GI284036465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.26317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCATT ATTATCCGGA GCACTACATG TTCTCCTACC AGCTTAACCG GGCACTTACG 
CAAAGTCATT TCGGGGGCGG TGAATTTTTT GAATGCATCG AAGCCGCCAG CCGAATTACC
GCCGGTGATT TCAAAAGTTT TAACGAAAGC TGGTCGCGGG CCGGGCACGA AGCCCTGGCC
GTAGCCGAAA AAGCTGAAGC TGCCGGGCAT ATCGTAACGG CAAGGCAGGC ATACCTCCGG
GCATCCAATT ACCTGCGGAC ATCGGAGTTT TTTCTTAAAC CGACCGACCC TCGTAAGGTA
CCGGGCTATC TGCAATCGGT CCATGCGTTT CAGAAAGGCG CTGCCCTGCT TCGGAATCCG
CCCCAAATTG TCAGCGTGCC CTTTGAAGGG TCGGAGATGA CGGGCTATTT TCTACAGCCT
GCCAACGCGG ACGCCAACAG CCCACTGATG ATTATGTTCG GGGGGCTGGA CTCGACTGCT
GAAGAACTCT ATTTCGGTCC CTGGCAGAAA CTCGAAGAGC GGGGCATTTC GCTGCTCGTG
CTCGATGGGC CGGGACAGGG TGGTTCGCTG CGGCTGCGCA ACATGCTGAC TCGTTACGAT
TACGAAGTAC CCGCCACCGT TGCCTTCGAC TGGGCACTGG CTAACCTACC CGTCGACCCG
AATCGAATTG GCATCATGGC CGTTTCGATG GGTGGCTACA TGGCGGCCCG GTCGGCTGCG
TTCGAGTCCC GATTTAAGGT TTGCTGCATC TGGGGAGCGG TCTGGAGTTA TTACGACATC
TGGAAAAACC GCCCCGACAA CCACCCGCTG GCGGGCGTCA TGATGCACAT CACCGGCTCG
ACCGATATGG ACGAAGCCCG CGAAAAACTC CGGAATTTCA CGCTGGAAGG CGTTGCCGAC
AAAATCAGTA TGCCCACCTA CATCTCACAC GGCGAAGACG ACCGGCAGAA CACCGTCGAG
AACGCCTACA AGCTGTACGA AGCCCTGACC TGCGAGAAAG CCATGAATAT TGTGTCGAAG
GAAGGAACTG GTTCGGCACA CTGCCACATC GACAACTTCA CCAAAGCTGA CCCCATGTTC
GACTGGCTGG AAGAGAAGAT GGGCACTATC GCTGTCGCAG CTGGTAGTAG TGAAAAAAAT
CAGGCCACGG CATAA
 
Protein sequence
MWHYYPEHYM FSYQLNRALT QSHFGGGEFF ECIEAASRIT AGDFKSFNES WSRAGHEALA 
VAEKAEAAGH IVTARQAYLR ASNYLRTSEF FLKPTDPRKV PGYLQSVHAF QKGAALLRNP
PQIVSVPFEG SEMTGYFLQP ANADANSPLM IMFGGLDSTA EELYFGPWQK LEERGISLLV
LDGPGQGGSL RLRNMLTRYD YEVPATVAFD WALANLPVDP NRIGIMAVSM GGYMAARSAA
FESRFKVCCI WGAVWSYYDI WKNRPDNHPL AGVMMHITGS TDMDEAREKL RNFTLEGVAD
KISMPTYISH GEDDRQNTVE NAYKLYEALT CEKAMNIVSK EGTGSAHCHI DNFTKADPMF
DWLEEKMGTI AVAAGSSEKN QATA