| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1526 |
|---|
| Symbol | |
|---|
| ID | 8725260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1840307 |
|---|
| End bp | 1841593 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | CDP-alcohol phosphatidyltransferase |
|---|
| Protein accession | YP_003386374 |
|---|
| Protein GI | 284036444 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.157789 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGG CACTTCCTCT TCGAACAAAA CTTCAACTGG GTATCTATAC CCTTATCAAC
CCATTTGTCC GGCTGTTGAT CCGGTTGGGA TTAACGCCCA ATATGGTAAC AGCCATTGGG
CTGGTGTTAA ACATAGGCGT GGCCCTGATC TTTATTGTTG GTGCCGAGCA GGGAAACCGG
GGTGATTTCA GTTATATCGG CTGGGCGGGT GCGCTGGTGC TGTTTGCCGG ACTATTCGAC
ATGCTGGATG GGCAGGTCGC GCGGTTGGGT AAGATGAGTT CGCTATACGG TGCCCTCTTC
GATTCAGTGC TCGACCGCTA CAGCGAACTG ATCCTGTTTC TGGGTATCTG TTATTATTTG
ATTGCCCATC ATTATTTCTT TAGCTCACTC TTTGCATTCG TCGCCCTGAT CGGCTCCATG
ATGGTCAGTT ATACCCGTGC CCGCGCCGAA GGGCTGGGTA TTGAGTGCAA GGGTGGCCTG
ATGCAGCGCC CCGAACGGGT CGTTATCATT GGTGTGTCGG CGCTGGCGTG CGGCTGTTTT
GCCCCGTTGC TGGGTCATGA TTTCAAACTT TACATACCGG GTATTCCGGT ACATGTTTTC
GAAACCATGA CCATTTTTAC CCTGCCGCTT ATGATTATGG CCATCATGAC CAACATTACG
GCGTTCAATC GGCTGACAGA TTCCAAAAAG GCACTGGAGG AAAAAGAAAA AACAACCACG
TCACCCAAGG TATTTATGCT GACGGTTTTA CTACTTAGCA GTGTGGCTGG TTATTCGCTA
CCGGCGAGTC GGGTTGCACC TGAACATCGG CAGGACAAGC CCGTGATTTC TTTTCCCACA
CCCAAAAACA TTCCCAACCA GTTATTTTAT ATTCAGCGGG ACCCGAATAC AAATACGATT
ATCTGCGCCC TGAACCTGAA AAATGGTCAG CTGGATAAGG AAGACCCTGT TCATGTGTTC
TGGATTCGGT ATACCGAGCA GAGCCAGCAA CAAGAGCTTT CGTACATCCA GCGGACCTTT
GCATATGGTA TCAAAGCACG CCATATGCGG AATGAGGAGT ACGAATTGAG CTTCGTTTCC
TATAAAAAAC TACCGCTCCA TCTGGCCAAA TCCGGCACCA ACGACTATTA CGTGTACGCC
AATGTAAACC AGAAAAAAGT GATTCTGAAG CGGATCTATC TACGGATAGA AGGAGGGACC
ATGTGGATGC CCAATGTAAA ATACATTCAG CTGGAGGGTA CAAACGCGCT AACCGGAGAA
TCGACCGTAG AGCGCATACC GGTCTAA
|
|---|
| Protein sequence | MQQALPLRTK LQLGIYTLIN PFVRLLIRLG LTPNMVTAIG LVLNIGVALI FIVGAEQGNR
GDFSYIGWAG ALVLFAGLFD MLDGQVARLG KMSSLYGALF DSVLDRYSEL ILFLGICYYL
IAHHYFFSSL FAFVALIGSM MVSYTRARAE GLGIECKGGL MQRPERVVII GVSALACGCF
APLLGHDFKL YIPGIPVHVF ETMTIFTLPL MIMAIMTNIT AFNRLTDSKK ALEEKEKTTT
SPKVFMLTVL LLSSVAGYSL PASRVAPEHR QDKPVISFPT PKNIPNQLFY IQRDPNTNTI
ICALNLKNGQ LDKEDPVHVF WIRYTEQSQQ QELSYIQRTF AYGIKARHMR NEEYELSFVS
YKKLPLHLAK SGTNDYYVYA NVNQKKVILK RIYLRIEGGT MWMPNVKYIQ LEGTNALTGE
STVERIPV
|
|---|
| |