| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1484 |
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| Symbol | |
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| ID | 8725218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1795562 |
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| End bp | 1798090 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003386333 |
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| Protein GI | 284036403 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGTCT GGATGATTTT AGACATAGTA CCTTACGTGA AAAACTTTCG CAAGACCCTC
TTTTTATGTT TGCTGGCGGC TGCTGTACAG GCCCAACAGC CCACTTCCCT GAAACTATGG
TATAACCAAC CGGCCGGGAA AGTCTGGACC AGTGCGCTAC CCGTTGGCAA TGGTCGGCTG
GGGGCCATGG TGTATGGAAA TCCGGAGCAG GAACTCATCA AATTGAACGA AGCCACCGTT
TGGTCGGGTG GGCCGAACCG GAACGATAAT CCCGATGCTC TGGCCGCCCT GCCTGAAATA
CGACGGTTGA TCTTTGCCGG GAAACAGGCC GAAGCGCAAA AACTGGCGGC TGCCAACATT
GAGACGAAGA AAAACAACGG TATGAAATAC CAGCCCGTGG GTAATCTTCA GCTGTCGTTT
ACAGGGCATC AGTCCGTTAC GAACTACTAC CGCGAACTGG ATATTGAAAA AGCCATTGCC
ACAACGATGT ATACGGTCGA TGGCGTTCGG TACATGCGCC AGGTTATCGC ATCCGTTCCC
GATCAGGTCA TTGCCGTTCG GCTGACGGCC GACAAACCGG GGAAATTATC ATTCACGGCA
TTCCTCAATA GCCCCCAGAA GGTTCAGCGG AGTGTTGAAG AGACCACTAA ACTGGTTATG
ACGGGTACCA CCAGCGACCA TGAAGGTGTA AAAGGTCAGG TGAACTTCAA TGCCCATGTG
CGCGTGGTGG CCGAGGGCGG GCAAACGACC AAAACGGATA CATCGGTGGT GATCAGCGGG
GCCAATGCCA CTACGCTGTA TGTATCGATG GCAACCAACG TTGTAGATTA CAAAACCCTC
ACCGCCGATC CTAAAACGCG GGCTGATTCA TATTTGACCC CGGCGGCCAA ACGTTCGTTC
AACGCCGTTT TGGCGGCTCA TGTAGCGGCT TATCAGCGCT ATTTTAAGCG AGTAAACCTT
GATTTGGGTA CATCGGATGC CGCTAAACTG CCTACGGACG AGCGCATCCG GCAGTTTGCG
TCGGGCAACG ATCCGCAGCT GGTATCGCTC TATTTTCAGT TCGGCCGTTA CCTGCTGATT
TCGGCTTCGC AGCCCAGCCG AAACGGGGTA GTGGGGCAGG TGGCCACCTT ACAGGGGCTT
TGGAACGACA GGATGGACCC GCCCTGGGAT AGTAAGTATA CCATCAACAT CAATACCGAA
ATGAACTACT GGCCGGCCGA AGTGACTAAC CTCACCGAGT TGCACGAACC GCTGGTGCAG
ATGGTGAAAG AGCTTTCGCA AACGGGTCAG GAAACGGCCA GGGTCATGTA CGGTGCCAGT
GGCTGGCTGG CCCACCACAA TACCGACCTC TGGCGGATTA CCGGCCCTGT CGATCCCATT
TATTATTCCA TGTGGCCAAT GGGGGGCGCG TGGCTGAGCC AGCATTTGTG GGAAAAGTAC
CAGTATTCGG GCGATAAAGC GTACTTGAAA TCAGTTTACC CGGCCATGAA GGGGGCTGCT
CAGTTTTTCG TCGATTACCT TGTCGAAGAT CCCAATCACC ATTATCTGGT CGTATGCCCG
GGTATGTCGC CCGAGAACGC GCCATCGACA CGCCCCGGCG TTTCCATTGA TGCGGGCGTT
ACGATGGATA ATCAGCTTGT GTTCGATATT TTTACCAATA CTATCCGGGC CGCTCAGGCT
CTCGGGACTG ATGCTGACTT CGTGAAAATC GTTGCGTCGA AACTGGCGCA ATTGCCACCC
ATGCAGGTTG GTAAGCACGG CCAGCTACAG GAGTGGATCG ATGATCTGGA TAGTCCTGAC
GACAAGCACC GGCACATCTC GCACCTCTAC GGCCTATACC CATCGGCGCA GTTGTCGGCC
TACCGCACAC CACAGCTGTT CCGTGCCGCC CGCAATACGC TTGAACAGCG GGGCGATGCA
TCGACGGGCT GGTCGATGGG CTGGAAGGTA AACTGGTGGG CGCGGCTCCT GGATGGTAAC
CGTGCCTATC GACTCATTAC CAACCAGCTA TCGCCCGTTA GTGAAGGCGG CAGAAACCGG
CCCGGCGGAA CAGGGGTTGG CGGTACGTAC AACAACCTGT TCGATGCCCA TCCGCCGTTT
CAGATCGACG GCAATTTTGG CTGCACGGCG GGTATCGCCG AAATGCTCAT GCAAAGTCAT
GACGAAGCCA TTCATTTGCT GCCTGCCCTG CCCGACCGCT GGCCGACGGG GCGTATCAGC
GGCCTTCGGG CACGGGGCGG CTTTGAGATC GTTTCGCTGG ACTGGAAAGA GGGAAAGGTG
GCCAGCGTAA CTATCAAATC GACGCTGGGC GGCAACTGCC GGGTTCGCGT GCCCAATGAA
TTACAGGCAA AAGGCTTCAA AACCGTTCTG AATGCAGCAA CGAACGCTAA TCCGTTTTAT
CAGCCGGTGG TTGTCAAAGA CCCCATTGTT TCGCCCCAGG CGCAGCTGAT CATGGCCAAA
CCCCGGATCG GGCAGGTGTA CGACTTTGCA ACGCAGCCCG GAAAAAGCTA TACCTTGATC
ATGAAGTAG
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| Protein sequence | MVVWMILDIV PYVKNFRKTL FLCLLAAAVQ AQQPTSLKLW YNQPAGKVWT SALPVGNGRL
GAMVYGNPEQ ELIKLNEATV WSGGPNRNDN PDALAALPEI RRLIFAGKQA EAQKLAAANI
ETKKNNGMKY QPVGNLQLSF TGHQSVTNYY RELDIEKAIA TTMYTVDGVR YMRQVIASVP
DQVIAVRLTA DKPGKLSFTA FLNSPQKVQR SVEETTKLVM TGTTSDHEGV KGQVNFNAHV
RVVAEGGQTT KTDTSVVISG ANATTLYVSM ATNVVDYKTL TADPKTRADS YLTPAAKRSF
NAVLAAHVAA YQRYFKRVNL DLGTSDAAKL PTDERIRQFA SGNDPQLVSL YFQFGRYLLI
SASQPSRNGV VGQVATLQGL WNDRMDPPWD SKYTININTE MNYWPAEVTN LTELHEPLVQ
MVKELSQTGQ ETARVMYGAS GWLAHHNTDL WRITGPVDPI YYSMWPMGGA WLSQHLWEKY
QYSGDKAYLK SVYPAMKGAA QFFVDYLVED PNHHYLVVCP GMSPENAPST RPGVSIDAGV
TMDNQLVFDI FTNTIRAAQA LGTDADFVKI VASKLAQLPP MQVGKHGQLQ EWIDDLDSPD
DKHRHISHLY GLYPSAQLSA YRTPQLFRAA RNTLEQRGDA STGWSMGWKV NWWARLLDGN
RAYRLITNQL SPVSEGGRNR PGGTGVGGTY NNLFDAHPPF QIDGNFGCTA GIAEMLMQSH
DEAIHLLPAL PDRWPTGRIS GLRARGGFEI VSLDWKEGKV ASVTIKSTLG GNCRVRVPNE
LQAKGFKTVL NAATNANPFY QPVVVKDPIV SPQAQLIMAK PRIGQVYDFA TQPGKSYTLI
MK
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