Gene Slin_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1449 
Symbol 
ID8725183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1760233 
End bp1760997 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF81 
Protein accessionYP_003386298 
Protein GI284036368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.151812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0760956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT ATACGGTTTT TATTCTCTGC GGATTCTCAT TCGTTGCAGG TTTTGTCGAT 
GCGATCATTG GTGGGGGTGG GTTGATTCAA ACACCGGCTA TCCTGTTTAG TCTGCCTCAA
TACCCGGTTC CAACCCTTAT TGGTACCACC AAAGTACCCT CTCTATCAGG CAGTCTGATG
GGTGCCTTTC AGTATAGCCG ACGGGTAGCG GTAGTGGGTC GGTTTATCGG CCCGATGATG
GCAATAGCCT TCGCGGCTTC ATGGCTTGGA TCGTGGACGC TCACGCGGGT ACCCAATAAT
TTCATGAAGC CCCTCGCGCT GGTTATTCTG ATCGGCGTGT TCATCTATAC CCTCACAAAA
AAAGATTTCG GTCAGGTATC GCATCGGGTT GTCACGGCGA GCCAGCAGCG AACACGCATG
TGGCTTATGG GGGGCGGAAT CGGTTTCTAC GATGGATTCT TCGGGCCGGG AACGGGGAGT
TTTCTGGTGC TCGGGTTCAT TACCCTGATC GGCTTTGACT TCCTGAAAGC CAATGCACAT
GCTAAACTGG TCAATGCATC AACGAATATG GCAAGTGCTC TGTTCTTTTT TCGTGAAGGC
CGAATCCTTT TTACCTTTGC TTTACCAATG GCCGTAGCCA ATTTATCGGG TGCTTTTCTG
GGAGCCCGGC TGGCTATTCT GAAAGGTAAT CAGTTTATAC GGGTGTTCTT TCTGGTGTTG
ATCGCGGCAA CCATACTCCG ATTTGCGTGG GATTTGATAA AGTAG
 
Protein sequence
MDFYTVFILC GFSFVAGFVD AIIGGGGLIQ TPAILFSLPQ YPVPTLIGTT KVPSLSGSLM 
GAFQYSRRVA VVGRFIGPMM AIAFAASWLG SWTLTRVPNN FMKPLALVIL IGVFIYTLTK
KDFGQVSHRV VTASQQRTRM WLMGGGIGFY DGFFGPGTGS FLVLGFITLI GFDFLKANAH
AKLVNASTNM ASALFFFREG RILFTFALPM AVANLSGAFL GARLAILKGN QFIRVFFLVL
IAATILRFAW DLIK