Gene Slin_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1417 
Symbol 
ID8725151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1722676 
End bp1723608 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content55% 
IMG OID 
Productesterase/lipase 
Protein accessionYP_003386266 
Protein GI284036336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.131998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.895698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT TCAATTTAGA CTATAAAGGC AGAAAAACAC TGTCGCTGGC AGCGTTAGCT 
GGCTGGTTGC TGGCTTCTTC GTTTTCCGTC TACGCCCAGG AAATCATCCC GTTGTATGCC
AGTCCTGTCC CCAATACCAA ACCGTCGGAT ATAAAAGAAA CCGGGGTAGA AACGGGCTTG
TTGAAAGGTA TTACCAAACC AACGCTGGAG TACTACAAAC CCGCGCCCGA TAAGGCGTCC
GGGGCGGCTG TCATCGTAAT TGCCGGGGGC GGCTATGGCG TGGTTGTATA CCAGGGCGAA
GGCGTCAATA CCGCGAAAGC GCTGGCCGAA AAGGGGGTGG CGGCTTTCGT GCTGAAGTAC
CGGCTGCCCA ACGATGCCAT CATGGCCGAT AAGAAAATCG GCCCGTTACA GGATGCCCAG
CAGGCTATTA AACTGGTTCG CGAAGGGGCC GCCAAATGGG GTATCGACGC CAGCAAAATC
GGCATCATGG GCTTTTCAGC GGGAGGGCAT CTGGCTTCTA CAGCGGCTAC GCATTTCGAG
AAAGCGTATG TCGAGAATGC CAGTAACACC AGCCTGCGTC CCGATTTTCA GATCCTGATT
TACCCAGTCA TCAGTATGCG CGATAGCCTG ACGCACGGCG GCTCGCGGGA TAACCTGATC
GGCAAAAATC CATCGCAGAC CGATGTTGAT CTGTTCTCCA ACGAGCTGCA GGTAAGGGCC
AACACCCCCC CAACGTACCT GACCCACGCG GCCGACGATA AGCTCGTCGA TGTGGATAAC
AGCATCATCT ATTTCGAACA GCTCCGACGT CAGAAAGTGC CGGTCGAAAT GCACATCTAC
CCAAAAGGCG ACCACGGGTT CATTTTCCGC CACCCCGGCT GGATGGACCC GCTCTTTGCG
TGGATGAAAG CAAACAACTG GGTGAAAAAC TAA
 
Protein sequence
MKRFNLDYKG RKTLSLAALA GWLLASSFSV YAQEIIPLYA SPVPNTKPSD IKETGVETGL 
LKGITKPTLE YYKPAPDKAS GAAVIVIAGG GYGVVVYQGE GVNTAKALAE KGVAAFVLKY
RLPNDAIMAD KKIGPLQDAQ QAIKLVREGA AKWGIDASKI GIMGFSAGGH LASTAATHFE
KAYVENASNT SLRPDFQILI YPVISMRDSL THGGSRDNLI GKNPSQTDVD LFSNELQVRA
NTPPTYLTHA ADDKLVDVDN SIIYFEQLRR QKVPVEMHIY PKGDHGFIFR HPGWMDPLFA
WMKANNWVKN