Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1391 |
Symbol | |
ID | 8725125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1691171 |
End bp | 1692091 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
Protein accession | YP_003386240 |
Protein GI | 284036310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.321363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAAC TTGCCCGTCA ACTCGCCAAT TTGGTCGGCA ACTCACCGCT TAAATTAATT GAAGCTCCGT TTCCGGAACC AGTGCCCATC CGTTTATTTC TTAAGCGCGA CGATTTGTTG CATCCGCTGG TATCGGGCAA TAAATGGCGG AAACTCAAGT ATAATCTGCT GGCCGCTCGC GGGCAGAAGG TGGACACCTT GCTGACGTTT GGAGGGGCGT ATTCCAACCA TCTGTACGCC ACGGCAGCCG CCGGACAGGT ATTTGGTTTT CGAACGATCG GTGTCGTGCG GGGCGACGAA CTCGTCCGAA AGCCGCTGAA AAGCACACTG GCTTTTTGCC AGGCATCCGG GATGCAGCTT CATTTCGTTA GCCGGGACGA CTATCGACGC AAAGAGGATG CCGATTTTCT GGATGTGTTA ACGGCCCAAT TCGGCCCCTG TTATGTATTG CCCGAAGGCG GAACCAACGA CCTGGCCATT CAGGGTACGG CGGAGATCAT CCCCGAAATT ACAGCCCAAC TGGGCCGCAT ACCCGATTTC GTGTGCTGTC CGGTGGGTAC GGGAGGAACG GTAGCCGGAC TGATAACGTC TGCTCTAAAA GAGACAAGCG TGTTGGGATT TATGGCGTTA AAAGTACCCG ACAGCCTGTG GCTGTCGGAG TTGTTTCCAT CGACAGCCAC AGGCTGTCGG GTACCTGATT ACCATTTTGG CGGATACGCC AGAACGACGC CGGAACTGCT GAACTTTATC AGGACTTTCG AAAAGAGAAA CGGCATCCTG TTGGAACAGG TTTATACCGG GAAGATGCTT TACGGTATTT ACGACCTCGC CCGACAAGGG TATTTTCCCG AAGGAGCCTC CGTCGTGGCA GTTCATACCG GCGGGTTGCA GGGCAGGAGT AAGGCGCTGG ATTCGGACTA A
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Protein sequence | MDELARQLAN LVGNSPLKLI EAPFPEPVPI RLFLKRDDLL HPLVSGNKWR KLKYNLLAAR GQKVDTLLTF GGAYSNHLYA TAAAGQVFGF RTIGVVRGDE LVRKPLKSTL AFCQASGMQL HFVSRDDYRR KEDADFLDVL TAQFGPCYVL PEGGTNDLAI QGTAEIIPEI TAQLGRIPDF VCCPVGTGGT VAGLITSALK ETSVLGFMAL KVPDSLWLSE LFPSTATGCR VPDYHFGGYA RTTPELLNFI RTFEKRNGIL LEQVYTGKML YGIYDLARQG YFPEGASVVA VHTGGLQGRS KALDSD
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