Gene Slin_1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1391 
Symbol 
ID8725125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1691171 
End bp1692091 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content54% 
IMG OID 
ProductPyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_003386240 
Protein GI284036310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.321363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAC TTGCCCGTCA ACTCGCCAAT TTGGTCGGCA ACTCACCGCT TAAATTAATT 
GAAGCTCCGT TTCCGGAACC AGTGCCCATC CGTTTATTTC TTAAGCGCGA CGATTTGTTG
CATCCGCTGG TATCGGGCAA TAAATGGCGG AAACTCAAGT ATAATCTGCT GGCCGCTCGC
GGGCAGAAGG TGGACACCTT GCTGACGTTT GGAGGGGCGT ATTCCAACCA TCTGTACGCC
ACGGCAGCCG CCGGACAGGT ATTTGGTTTT CGAACGATCG GTGTCGTGCG GGGCGACGAA
CTCGTCCGAA AGCCGCTGAA AAGCACACTG GCTTTTTGCC AGGCATCCGG GATGCAGCTT
CATTTCGTTA GCCGGGACGA CTATCGACGC AAAGAGGATG CCGATTTTCT GGATGTGTTA
ACGGCCCAAT TCGGCCCCTG TTATGTATTG CCCGAAGGCG GAACCAACGA CCTGGCCATT
CAGGGTACGG CGGAGATCAT CCCCGAAATT ACAGCCCAAC TGGGCCGCAT ACCCGATTTC
GTGTGCTGTC CGGTGGGTAC GGGAGGAACG GTAGCCGGAC TGATAACGTC TGCTCTAAAA
GAGACAAGCG TGTTGGGATT TATGGCGTTA AAAGTACCCG ACAGCCTGTG GCTGTCGGAG
TTGTTTCCAT CGACAGCCAC AGGCTGTCGG GTACCTGATT ACCATTTTGG CGGATACGCC
AGAACGACGC CGGAACTGCT GAACTTTATC AGGACTTTCG AAAAGAGAAA CGGCATCCTG
TTGGAACAGG TTTATACCGG GAAGATGCTT TACGGTATTT ACGACCTCGC CCGACAAGGG
TATTTTCCCG AAGGAGCCTC CGTCGTGGCA GTTCATACCG GCGGGTTGCA GGGCAGGAGT
AAGGCGCTGG ATTCGGACTA A
 
Protein sequence
MDELARQLAN LVGNSPLKLI EAPFPEPVPI RLFLKRDDLL HPLVSGNKWR KLKYNLLAAR 
GQKVDTLLTF GGAYSNHLYA TAAAGQVFGF RTIGVVRGDE LVRKPLKSTL AFCQASGMQL
HFVSRDDYRR KEDADFLDVL TAQFGPCYVL PEGGTNDLAI QGTAEIIPEI TAQLGRIPDF
VCCPVGTGGT VAGLITSALK ETSVLGFMAL KVPDSLWLSE LFPSTATGCR VPDYHFGGYA
RTTPELLNFI RTFEKRNGIL LEQVYTGKML YGIYDLARQG YFPEGASVVA VHTGGLQGRS
KALDSD