Gene Slin_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1355 
Symbol 
ID8725088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1650440 
End bp1650967 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID 
Product5 nucleotidase deoxy cytosolic type C 
Protein accessionYP_003386204 
Protein GI284036274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.460561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GAATTGCGAT TGACATGGAT GATGTCATGG CTGACACACA CGCCAAGTTC 
ATTAAACTGT ATCTTGAAGG CGAAATGCCG CGCTACACCC TTGAGGAACT AAAGGAAAAA
TCGTTCCATG AGCTATTTGA CGAGCATGAG TACAAAGCCA TATCGGAGCG AGTGTACGAA
CCTGGTTTTT TCCGGGACAT TCCAGTTATG GAAGGCGCGA AAGAAGTGAT TGGTCAGTTG
ATGCAAAAAT ATGACGTGTT TGTAGCCTCG GCTGCCCAGG AGTTCCCGAA CTCGCTACGG
GAGAAATGGG ATTGGCTACA AGAGCATTTT CCGGACATTT CCTGGCATAA CTACATCTTT
CTGGGGGATA AAAGTGTATT AAACACCGAT TATCTGATCG ACGATTTACC CCGAAACCTC
AAGACGTTCC AGGGCGAAGG ATTGCTCTTC GATGCACTGC ACAACCGCGA AGACACCGAA
TTCAAACGGG TAAAAACCTG GCACGATATT GCCAAACAGT TGCTGTAG
 
Protein sequence
MKKRIAIDMD DVMADTHAKF IKLYLEGEMP RYTLEELKEK SFHELFDEHE YKAISERVYE 
PGFFRDIPVM EGAKEVIGQL MQKYDVFVAS AAQEFPNSLR EKWDWLQEHF PDISWHNYIF
LGDKSVLNTD YLIDDLPRNL KTFQGEGLLF DALHNREDTE FKRVKTWHDI AKQLL