Gene Slin_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1353 
Symbol 
ID8725086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1648768 
End bp1649427 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386202 
Protein GI284036272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.187425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TCCTTATCGT TTTCGTTCTT CTACATTCTT CAGTAATCAT TGCGAATGCA 
CAGTACGCTT ATAAAATTGC CAAGCTGAAG TACAATGGCG GGGGGGACTG GTATGCAAAT
AAAACCTCCC TACCTAACCT GATTAAGTTT GCGAATGCCA GCCTGCGCAT GAACATATTC
CCGGAAGAGG ATATTGTTGA ACCGGGTAGC CCTGATATTT TCGGATATCC GTTTGTACAC
ATGACGGGTC ACGGAAATGT TACCTTCAGC GATGCTGATG TGCAAAACCT GCGTCGATAC
CTGATGTCGG GTGGTTTTTT ACATATTGAC GATAACTACG GGCTGGATAA ATTTATCCGA
CGTGAAATGA AGAAGGTCTT TCCTGAGCTT AACTTCATCG AACTGCCGTT CAATCACCCT
GTTTATCAGC AAAAGTTTAA GTTTGCCAGC GGTTTACCTA AGGTACATGA GCATGACGCC
AAGGCACCCC AGGGGTTCGG CCTGATCTAT CAGGGTCGGT TGGTTTGTTT TTACAGTTAT
GAGTGCGATT TGGGGAATGG CTGGGAGGAT CAGAGTGTCT ACAATGACCC TGAACCGGTA
CGTCAGCAGG CGCTTCGCAT GGGTGCTAAT CTGCTGCAAT ACGCAACAAC CACAAATTAA
 
Protein sequence
MKKLLIVFVL LHSSVIIANA QYAYKIAKLK YNGGGDWYAN KTSLPNLIKF ANASLRMNIF 
PEEDIVEPGS PDIFGYPFVH MTGHGNVTFS DADVQNLRRY LMSGGFLHID DNYGLDKFIR
REMKKVFPEL NFIELPFNHP VYQQKFKFAS GLPKVHEHDA KAPQGFGLIY QGRLVCFYSY
ECDLGNGWED QSVYNDPEPV RQQALRMGAN LLQYATTTN