Gene Slin_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1325 
Symbol 
ID8725058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1623132 
End bp1623749 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386174 
Protein GI284036244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.125239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.126591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACCTT TTTTCTTTAC CCGTATTCAG TACACGTCCG GCGATTGGGA TACCGATCAA 
CGAATGCCGT CGAACCTGCT GCATTCGCTG GTTGAATACA CAACCCTGCC GATTGACCAG
AAGGAAAAGG TGGTGCAGTT GAGTAGCCCC GACTTGTTTA AAAGCCCTTT TTGCTACCTG
AGCGGGCATA AGTTGGTGGA GTTTTCGGCG CAGGAACGTG ACCACTTCAA ACGATACGTA
CAGAATGGCG GCTTCGTATT TGTCGACGAC TGTAACCATG ATGTCGACGG TTTATTTGCC
AAGTCATTTG AACAGGAAAT GGGGCGCACG TTCGGACAGA AGGCATTACA GAAAATCCCC
AATACCCATC CCATCTACAC CTGTTTTTTC AAGTTTGAAG AAGGCCCGCC AACCACCTCG
TTTGAGCTGA ACGGATGGGG GGATGACCTT GTACACGACT ACCTGAAAGC CATCATCGTA
AACGGCCGCA TCGGTGTCTT ATACAGCAAT AAAGATTATG GTTGTGAATG GGATTATGAT
TTCCGGAACA AACGATTTCT GGCCGAAGAC AACACTAAAT TCGGCGTCAA TATTATTACC
TACGCGCTGA CCGCGTGA
 
Protein sequence
MKPFFFTRIQ YTSGDWDTDQ RMPSNLLHSL VEYTTLPIDQ KEKVVQLSSP DLFKSPFCYL 
SGHKLVEFSA QERDHFKRYV QNGGFVFVDD CNHDVDGLFA KSFEQEMGRT FGQKALQKIP
NTHPIYTCFF KFEEGPPTTS FELNGWGDDL VHDYLKAIIV NGRIGVLYSN KDYGCEWDYD
FRNKRFLAED NTKFGVNIIT YALTA