Gene Slin_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1322 
Symbol 
ID8725055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1619840 
End bp1621033 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386171 
Protein GI284036241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.944811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.143709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTG TTGAGCCGTT TTTGTTGTGG GGTGCGTTAG CCGTCTCGAT TCCGGTGGCC 
ATTCACTTCT GGCACCAGAA GCAGGGAAAA CCCCTGCCCT GGGCGGCTAC ACAGTGGCTT
ATCGAGAAGC AACAGCAACA GAGTCGCGGC TTTCGGCTGG ATAACGTTCC CCTGCTGATT
ATCCGATGCC TGCTGCTGAT CCTACTGGCC TTTCTGTTGG CGCAACCCAT ACTGAACTGG
TTTCAACAGC CACCCGCCAT TCAGAAAGTG CACCTAGTAC AGCCCAGCCA GGCCGTTGCC
GACAACTACA AATTTGAACT TACCGACGCC CGCAAGAAAG GAGAGAAAGT CATTTGGGCC
GATGAGCGTC TGAGTGAACT AGACGACAAG CCAATCAACG GTCAGCCATC GACCCGATTC
AGTGCGTTAA AATTACAAAC CGCCATCAAC CGGCTGGATA CTAAAAACAC TGAACTCCAC
CTTTACTTAA TTAACAGTCA GAAACTGGCC GATGTACCCG TCATTTCGGT ACCCGCCAAA
TTCAGTCTGC ACACGGCAGT CGATTCAGCG GCTCAGCCTC GTCCGTATCT GGTCGTTAAA
AATGAGCAGA AGATGTTCAT TAACCGGACG GGTAAGCTGG TCAGCCTACC AACTCTTGAC
CCAACACTAA AATTTCAGTC GGTACCCGTC CATTCGGGAC CAATAGCCGT TTTACTTAGT
TACCAGAAAG CACAGGAGCA ACAAACCGTT AAGGCTGCTC TGGCCGCTTT GTCGGATGTG
TACGGTTTTG ACTTCTCGAT TGATGATAAA CCGGCATCCA ACCGCAGTTA CGATTGGATA
CTGACCGATA AACTACCGTC AAAGCCATCC CCTCAAACGT TTTACACCCT TTCGGGCATG
GCGCAACTAG ATGGACAGGC TAACGTAATG TTTACGAACG AGTCCTTAAC GCCCCAAACG
TCTGACCGGG CTGCTACGGG GCAATTGCCC GAATGGCTCG GGTTGCAGTT ACTGCATCAT
TATGAGCTTG GTTTGACCAA TGCTTCTCTC AGCAACAGAG ACTTACAATC ACTATTTGTT
CCAACCAACA AACCCACAAC CGAACAACAG GCAGGCATAC AGCATGGCCT TTTGTTGTTA
TTCGTTTGTT TGTTAGCCGT TGAACGCTGG ATCGCCTTAA CAAAAAACGC ATGA
 
Protein sequence
MQFVEPFLLW GALAVSIPVA IHFWHQKQGK PLPWAATQWL IEKQQQQSRG FRLDNVPLLI 
IRCLLLILLA FLLAQPILNW FQQPPAIQKV HLVQPSQAVA DNYKFELTDA RKKGEKVIWA
DERLSELDDK PINGQPSTRF SALKLQTAIN RLDTKNTELH LYLINSQKLA DVPVISVPAK
FSLHTAVDSA AQPRPYLVVK NEQKMFINRT GKLVSLPTLD PTLKFQSVPV HSGPIAVLLS
YQKAQEQQTV KAALAALSDV YGFDFSIDDK PASNRSYDWI LTDKLPSKPS PQTFYTLSGM
AQLDGQANVM FTNESLTPQT SDRAATGQLP EWLGLQLLHH YELGLTNASL SNRDLQSLFV
PTNKPTTEQQ AGIQHGLLLL FVCLLAVERW IALTKNA