Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1320 |
Symbol | |
ID | 8725053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1615957 |
End bp | 1617609 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386169 |
Protein GI | 284036239 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.162139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.198173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAC CTGTAAACTG GACCGAACCG ATAACCTGGT TTATCGCCCT GGCGTTAGTC ATCCTATTGG TGGGTCAGCT TTGGCTTATC GGCCGCAATC AATCGATAGC CACCGGCCGA AAATCACTTC GAGCCGGTTT AAATATCCTC CTCTGGCTGA TTGTGCTTGG TTATTTTCTC CAGTTTAAAT GGCAACGTGA ACGCCCGGCC ACGCATGCTC TACTCGTTGG CGACGAGGTA CCATCAGCCG TAGCCCGTCA GGTTCGGGAT AGTCTCAACC TTCAGGACAG CTTTACCAGT CGAAATTTAA AAGACGAGTA CGATTCGTTG ACCCTGATTG GCCAGCGATT TCCAACCGCA ACCCTGACTC AGATCAGCCA GTCGGCTCTG CAATGGATAC CTTATACCGA GCCTAATTCT ATACAAAGCC TACATTGGAA AGGCATTGTT CGACAGGGGG AAATTCAGCG GGTTACGGGC CGGATTCAGT CATTGAAGAA TGCTTTACTT CGGGTAAAAT TTGGCAATAG AACACTCGAT AGTGTGACTC TGCACGAGGG CGAGAACACA TTTTCGCTTA AATTCCCTGC TTTTTCGCGG GGGCGAACCC AAACGGAATT AGTGCTGGGC AAAAATACCC TCGACACGGT TCGGTACTTC ACCAGGCCAA TTGAGCCGCT GACGGTTGTA TTTTTACTCA ACAGCCCAGA CTTCGAGAGC AACACATTAG CGGGCTGGCT CGGTAAACAG GGGCATACGG TTCAGGTGTC GACTACCTTA TCGAAGAATA TCAGCAGCAA CGTCAGCATC AACAAAGCGG GCAAATCTGT TGGCAAAACC ACGCCAGACC TGATCATCAC GGAATCCGCC AATGCCGCCA ACCCGACCGT TCGCAAAGCC GTTGCCGATG GGAAAGCCGT TCTGTTCATC AACATCACCA ATCCGGAAAT CGAGAGTCGG GCCATCAACC AGGCATTAGG TAGCCGCTGG CAGGTCAGGA AAACAGGCAA CGAAGCGACC GTTCCGGTTG GCAATGGACT GACTGCACTG CCCTACCGAT TCACTGATAA TCTCAATCAA TTTGCTGTAA CCGGTTACCC GATTGCCGTG CAGCGAAGCA CACGCGGATC TGCCGGACGT ATCGGGGTTA GTTTGTTGAG CGAAACCTAT CCGTTGTCGC TCAGTGGCGA CAGCGTTTCT TATAACCGGG TCTGGACTGC CGTGCTGGCC CGGCTTTCAT CTGCTGACAA ACCCACGATT CAAGTCAATT CGCCCGTTTA TAGTGGTTTG CAGCAGCAGA TTCTTGTCAA CAACACGACC GGCACGTCGC GTAAGCTGAT CATTGGTCAG GATACGGTTA CCCTCACACC CTCGCCCGTC AATGAACGTT CGGCAGTTGG TTTATCTCTT TTTAGACAAA CCGGCTGGCA ACCGGCGCAG GATTCGCTGG CACTCTTCGT AAATGCGCGT AACCAATCAG ACCCGGTAGC CGAAAGGCAG ACGGTCAGCC GATTTATGCT GGCTCATGCA CAGGCTAACT TATCATCCCA GCAACCCTCC CGCACCACCA CATCCAAGGT GCCGAACTGG GTGTGGCTCG TTTTATTTCT TGGCTGCTTT ACGGCTTTGT GGATTGAGCC AAAGCTGGTA TAG
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Protein sequence | MQTPVNWTEP ITWFIALALV ILLVGQLWLI GRNQSIATGR KSLRAGLNIL LWLIVLGYFL QFKWQRERPA THALLVGDEV PSAVARQVRD SLNLQDSFTS RNLKDEYDSL TLIGQRFPTA TLTQISQSAL QWIPYTEPNS IQSLHWKGIV RQGEIQRVTG RIQSLKNALL RVKFGNRTLD SVTLHEGENT FSLKFPAFSR GRTQTELVLG KNTLDTVRYF TRPIEPLTVV FLLNSPDFES NTLAGWLGKQ GHTVQVSTTL SKNISSNVSI NKAGKSVGKT TPDLIITESA NAANPTVRKA VADGKAVLFI NITNPEIESR AINQALGSRW QVRKTGNEAT VPVGNGLTAL PYRFTDNLNQ FAVTGYPIAV QRSTRGSAGR IGVSLLSETY PLSLSGDSVS YNRVWTAVLA RLSSADKPTI QVNSPVYSGL QQQILVNNTT GTSRKLIIGQ DTVTLTPSPV NERSAVGLSL FRQTGWQPAQ DSLALFVNAR NQSDPVAERQ TVSRFMLAHA QANLSSQQPS RTTTSKVPNW VWLVLFLGCF TALWIEPKLV
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