Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1216 |
Symbol | |
ID | 8724949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1477963 |
End bp | 1478667 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | metallophosphoesterase |
Protein accession | YP_003386065 |
Protein GI | 284036135 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.148055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCC TCGCCATTAG TGATCTTCAC GGAAGGACCG TTTGGAAAGA AGCAGACCTT GACCAATACG ACCGGGTTGT CTTCCTGGGT GACTATACGG ATAGTCATAC CTTTGATGAT GAAACCATAT TCAATAACCT GCTTGATATC ATCTGGCTTA AGTACCAGAA CCCCGCAAAG TTTATTCTGC TTATTGGCAA CCATGATGCG CAATACCTGC ATTTTCCGCA GTATCGTTGT TCAGGGTTTC GGGAGAAAGC ACAGCCTGAG TTGAGTTTCT TATTCACAAC ACACATTAAC CTGTTTCAAC TGGCTTATCA GGAAGGTAAT TACCTGTTTA CTCATGCCGG TGTAACCAAA AAATGGCTGG CGCATTTTCT TGTAAAAACC GGTAAAAAAC TAATTGAACG TACATCTGTT GATAATCTGG CCGGATTATT GAATAAGGTG CATAAAGAAG ACATAAGTTT TCGAAGCCTG CTTTTTGAAG TTGGACCGAA ACGGGGAGGC TTTGATGCCT ACGGCGGGCC TGTTTGGGCA GATCGCTCGG AAACCTCTGT TGACTTCCTG ATGGGATTTC AGCAGGTTGT AGGACATACG CCCGTTTTTG ATTTTTCGAC AATATACGGT GAAAGTGGGT CGATTACTTA TACGGATGTT TTGCAAACCA AAACGGCATT TTATGAAGTC ATAATCCGTG ACTAA
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Protein sequence | MKLLAISDLH GRTVWKEADL DQYDRVVFLG DYTDSHTFDD ETIFNNLLDI IWLKYQNPAK FILLIGNHDA QYLHFPQYRC SGFREKAQPE LSFLFTTHIN LFQLAYQEGN YLFTHAGVTK KWLAHFLVKT GKKLIERTSV DNLAGLLNKV HKEDISFRSL LFEVGPKRGG FDAYGGPVWA DRSETSVDFL MGFQQVVGHT PVFDFSTIYG ESGSITYTDV LQTKTAFYEV IIRD
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